Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL109933.3-201ENST00000619095 188 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 AC027335.2-201ENST00000624030 375 ntBASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SCUBE3Q8IX30 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 RNU6-1187P-201ENST00000364771 110 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 SNORA64-201ENST00000384674 134 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 SNORA26.9-201ENST00000391322 122 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 MIR938-201ENST00000401216 83 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 SNORD75.2-201ENST00000408784 58 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 MTND4LP1-201ENST00000446263 157 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 RNU7-24P-201ENST00000458867 62 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 MIR4287-201ENST00000579398 78 ntBASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SCUBE3Q8IX30 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 RNU7-13P-201ENST00000516413 62 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 RNU6-295P-201ENST00000516901 104 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 MIR3937-201ENST00000580135 106 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 MIR5002-201ENST00000584713 97 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 AC103810.8-201ENST00000607347 118 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 AC106800.4-201ENST00000614905 153 ntBASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
SCUBE3Q8IX30 MIR216B-201ENST00000390186 82 ntBASIC2.23□□□□□ -2.05
SCUBE3Q8IX30 RNU7-102P-201ENST00000458948 62 ntBASIC2.23□□□□□ -2.05
SCUBE3Q8IX30 MIR4781-201ENST00000585250 76 ntBASIC2.23□□□□□ -2.05
SCUBE3Q8IX30 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SCUBE3Q8IX30 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
SCUBE3Q8IX30 RNU6-495P-201ENST00000362995 107 ntBASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 RNU6-668P-201ENST00000364180 107 ntBASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 AC048334.1-201ENST00000477975 159 ntBASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 RNU7-40P-201ENST00000516397 64 ntBASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 MIR219B-201ENST00000637023 88 ntBASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCUBE3Q8IX30 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 RNU6-1039P-201ENST00000383931 107 ntBASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 SNORA44.1-201ENST00000517031 108 ntBASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 MIR4299-201ENST00000577899 72 ntBASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCUBE3Q8IX30 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 Y_RNA.118-201ENST00000363300 101 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 MIR30A-201ENST00000385092 71 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 SNORA75.2-201ENST00000391138 150 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 SNORA75.3-201ENST00000391231 150 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 RNU6-542P-201ENST00000516405 103 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 AL512310.8-201ENST00000550183 120 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 MIR3920-201ENST00000581751 86 ntBASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
SCUBE3Q8IX30 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 AC079804.2-201ENST00000490376 200 ntBASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 AC023827.1-201ENST00000569247 97 ntBASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 MIR6509-201ENST00000614603 85 ntBASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCUBE3Q8IX30 RNU6-1126P-201ENST00000384002 107 ntBASIC2.18□□□□□ -2.06
SCUBE3Q8IX30 RNU6-977P-201ENST00000516411 103 ntBASIC2.18□□□□□ -2.06
SCUBE3Q8IX30 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SCUBE3Q8IX30 RNU1-17P-201ENST00000363022 152 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 RNA5SP403-201ENST00000363598 108 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 RNU7-56P-201ENST00000458744 62 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 NAMPTP3-201ENST00000569273 224 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 MIR548AG2-201ENST00000581228 64 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 MIR4804-201ENST00000581683 73 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 AC092634.7-201ENST00000621022 103 ntBASIC2.17□□□□□ -2.06
SCUBE3Q8IX30 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 SNORD115-24-201ENST00000363528 82 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 Y_RNA.375-201ENST00000365625 101 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 RNU4-52P-201ENST00000384209 138 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 RNU1-119P-201ENST00000391122 165 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 AL591704.2-201ENST00000421658 181 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 AC073869.9-201ENST00000641610 120 ntBASIC2.16□□□□□ -2.06
SCUBE3Q8IX30 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
SCUBE3Q8IX30 Y_RNA.355-201ENST00000365462 98 ntBASIC2.15□□□□□ -2.07
SCUBE3Q8IX30 MIR617-201ENST00000385030 97 ntBASIC2.15□□□□□ -2.07
SCUBE3Q8IX30 SNORA31.2-201ENST00000516019 134 ntBASIC2.15□□□□□ -2.07
SCUBE3Q8IX30 RNU6-369P-201ENST00000362515 102 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 Y_RNA.174-201ENST00000363781 105 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 RNA5SP160-201ENST00000364866 120 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 Y_RNA.363-201ENST00000365529 113 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 SNORA31.14-201ENST00000516728 116 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 AL359821.1-201ENST00000605519 182 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 snoU13.31-201ENST00000607291 104 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 uc_338.16-201ENST00000621804 95 ntBASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
SCUBE3Q8IX30 ZNF355P-201ENST00000427301 3216 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 RNU6-829P-201ENST00000363700 112 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 MIR203A-201ENST00000384836 110 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 AC067940.1-201ENST00000458411 300 ntBASIC2.13□□□□□ -2.07
SCUBE3Q8IX30 RNU7-21P-201ENST00000459430 62 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 250.9 ms