Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC096720.1-201ENST00000604441 183 ntBASIC0.13□□□□□ -2.39
NEK3P51956 RNU1-29P-201ENST00000606574 126 ntBASIC0.13□□□□□ -2.39
NEK3P51956 MIR6718-201ENST00000616153 80 ntBASIC0.13□□□□□ -2.39
NEK3P51956 Y_RNA.173-201ENST00000363776 113 ntBASIC0.12□□□□□ -2.39
NEK3P51956 RNU6-704P-201ENST00000364162 103 ntBASIC0.12□□□□□ -2.39
NEK3P51956 MIR516A2-201ENST00000384888 90 ntBASIC0.12□□□□□ -2.39
NEK3P51956 MIR516A1-201ENST00000385033 90 ntBASIC0.12□□□□□ -2.39
NEK3P51956 RNU6-269P-201ENST00000391077 97 ntBASIC0.12□□□□□ -2.39
NEK3P51956 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.12□□□□□ -2.39
NEK3P51956 MIR3133-201ENST00000583157 78 ntBASIC0.12□□□□□ -2.39
NEK3P51956 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.12□□□□□ -2.39
NEK3P51956 MIR4743-201ENST00000584576 69 ntBASIC0.12□□□□□ -2.39
NEK3P51956 RNU6-243P-201ENST00000391140 107 ntBASIC0.11□□□□□ -2.39
NEK3P51956 MIR892B-201ENST00000401279 77 ntBASIC0.11□□□□□ -2.39
NEK3P51956 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.11□□□□□ -2.39
NEK3P51956 Y_RNA.649-201ENST00000459077 103 ntBASIC0.11□□□□□ -2.39
NEK3P51956 RNU7-107P-201ENST00000459121 61 ntBASIC0.11□□□□□ -2.39
NEK3P51956 AC007012.1-201ENST00000567192 175 ntBASIC0.11□□□□□ -2.39
NEK3P51956 MIR4752-201ENST00000579672 72 ntBASIC0.11□□□□□ -2.39
NEK3P51956 MIR3920-201ENST00000581751 86 ntBASIC0.11□□□□□ -2.39
NEK3P51956 Y_RNA.57-201ENST00000362806 113 ntBASIC0.1□□□□□ -2.39
NEK3P51956 Y_RNA.660-201ENST00000516002 120 ntBASIC0.1□□□□□ -2.39
NEK3P51956 RNU6-659P-201ENST00000516454 104 ntBASIC0.1□□□□□ -2.39
NEK3P51956 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
NEK3P51956 MIR610-201ENST00000385139 96 ntBASIC0.09□□□□□ -2.4
NEK3P51956 RNU7-129P-201ENST00000516128 62 ntBASIC0.09□□□□□ -2.4
NEK3P51956 MIR4694-201ENST00000578534 80 ntBASIC0.09□□□□□ -2.4
NEK3P51956 uc_338.28-201ENST00000612082 187 ntBASIC0.09□□□□□ -2.4
NEK3P51956 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.09□□□□□ -2.4
NEK3P51956 RNA5SP257-201ENST00000363023 116 ntBASIC0.08□□□□□ -2.4
NEK3P51956 RNU6-652P-201ENST00000365488 107 ntBASIC0.08□□□□□ -2.4
NEK3P51956 RNU6-127P-201ENST00000390897 107 ntBASIC0.08□□□□□ -2.4
NEK3P51956 RNU6-782P-201ENST00000516852 104 ntBASIC0.08□□□□□ -2.4
NEK3P51956 Y_RNA.71-201ENST00000362892 104 ntBASIC0.07□□□□□ -2.4
NEK3P51956 RNA5SP214-201ENST00000363378 118 ntBASIC0.07□□□□□ -2.4
NEK3P51956 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
NEK3P51956 SNORD36A-201ENST00000362874 73 ntBASIC0.06□□□□□ -2.4
NEK3P51956 Y_RNA.218-201ENST00000364218 104 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD114-9-201ENST00000364370 72 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-14-201ENST00000383894 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-17-201ENST00000383929 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-15-201ENST00000384445 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 SNORD116-19-201ENST00000384729 92 ntBASIC0.06□□□□□ -2.4
NEK3P51956 RNU6-1125P-201ENST00000363601 107 ntBASIC0.05□□□□□ -2.4
NEK3P51956 Y_RNA.247-201ENST00000364500 92 ntBASIC0.05□□□□□ -2.4
NEK3P51956 RNU6-480P-201ENST00000384332 107 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MIR548A3-201ENST00000385297 97 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MT-TR-201ENST00000387439 65 ntBASIC0.05□□□□□ -2.4
NEK3P51956 AC141557.1-201ENST00000540982 400 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MIR548AD-201ENST00000584780 82 ntBASIC0.05□□□□□ -2.4
NEK3P51956 SNORA70.25-201ENST00000612741 95 ntBASIC0.05□□□□□ -2.4
NEK3P51956 MIR2909-201ENST00000617113 69 ntBASIC0.05□□□□□ -2.4
NEK3P51956 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.05□□□□□ -2.4
NEK3P51956 MIR617-201ENST00000385030 97 ntBASIC0.04□□□□□ -2.4
NEK3P51956 AC006210.1-201ENST00000424882 111 ntBASIC0.04□□□□□ -2.4
NEK3P51956 AL670379.3-201ENST00000605040 251 ntBASIC0.04□□□□□ -2.4
NEK3P51956 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
NEK3P51956 SNORD110-201ENST00000408189 75 ntBASIC0.03□□□□□ -2.4
NEK3P51956 AC068339.1-201ENST00000526965 141 ntBASIC0.03□□□□□ -2.4
NEK3P51956 AL035470.1-201ENST00000622571 220 ntBASIC0.03□□□□□ -2.4
NEK3P51956 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.03□□□□□ -2.4
NEK3P51956 RNY3P2-201ENST00000362918 102 ntBASIC0.02□□□□□ -2.41
NEK3P51956 RNU6-1163P-201ENST00000364516 107 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR577-201ENST00000385196 96 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR501-201ENST00000390204 84 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR5190-201ENST00000581537 80 ntBASIC0.02□□□□□ -2.41
NEK3P51956 MIR4439-201ENST00000583746 80 ntBASIC0.02□□□□□ -2.41
NEK3P51956 Y_RNA.563-201ENST00000384707 108 ntBASIC0.01□□□□□ -2.41
NEK3P51956 SNORD33.1-201ENST00000516213 88 ntBASIC0.01□□□□□ -2.41
NEK3P51956 RNU6-1232P-201ENST00000516299 86 ntBASIC0.01□□□□□ -2.41
NEK3P51956 TRDV1-202ENST00000621643 102 ntBASIC0.01□□□□□ -2.41
NEK3P51956 MIR499B-201ENST00000636498 73 ntBASIC0.01□□□□□ -2.41
NEK3P51956 MIR548M-201ENST00000408260 86 ntBASIC0□□□□□ -2.41
NEK3P51956 Y_RNA.596-201ENST00000410462 109 ntBASIC0□□□□□ -2.41
NEK3P51956 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
NEK3P51956 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
NEK3P51956 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 RNU6-774P-201ENST00000363238 107 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 RNU6-832P-201ENST00000363319 107 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 RNA5SP484-201ENST00000458857 111 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 NAMPTP3-201ENST00000569273 224 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 MIR5009-201ENST00000578736 100 ntBASIC-0.01□□□□□ -2.41
NEK3P51956 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.02□□□□□ -2.41
NEK3P51956 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 RNU1-141P-201ENST00000364623 158 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 MIR548A1-201ENST00000385041 97 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 MIR643-201ENST00000385267 97 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 RNU6-466P-201ENST00000391224 103 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 RNU6-412P-201ENST00000516434 106 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
NEK3P51956 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 U8.6-201ENST00000364939 135 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 RNU6-959P-201ENST00000384671 107 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 MIR4677-201ENST00000584153 80 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.03□□□□□ -2.41
NEK3P51956 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 224 ms