Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 RNU6-321P-201ENST00000410912 106 ntBASIC1.74□□□□□ -2.13
USP11P51784 SNORA31.2-201ENST00000516019 134 ntBASIC1.74□□□□□ -2.13
USP11P51784 RNU7-40P-201ENST00000516397 64 ntBASIC1.74□□□□□ -2.13
USP11P51784 AC023827.1-201ENST00000569247 97 ntBASIC1.74□□□□□ -2.13
USP11P51784 MIR4303-201ENST00000581299 66 ntBASIC1.74□□□□□ -2.13
USP11P51784 MIR4422-201ENST00000581938 83 ntBASIC1.74□□□□□ -2.13
USP11P51784 SNORD101-201ENST00000384027 73 ntBASIC1.73□□□□□ -2.13
USP11P51784 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
USP11P51784 RPS26P5-201ENST00000418544 335 ntBASIC1.73□□□□□ -2.13
USP11P51784 AC097635.1-201ENST00000450678 155 ntBASIC1.73□□□□□ -2.13
USP11P51784 RNU6-539P-201ENST00000516665 103 ntBASIC1.73□□□□□ -2.13
USP11P51784 MIR4676-201ENST00000583078 72 ntBASIC1.73□□□□□ -2.13
USP11P51784 AC106800.4-201ENST00000614905 153 ntBASIC1.73□□□□□ -2.13
USP11P51784 RNU6-590P-201ENST00000365039 107 ntBASIC1.72□□□□□ -2.13
USP11P51784 RNU6-291P-201ENST00000384720 107 ntBASIC1.72□□□□□ -2.13
USP11P51784 MIR599-201ENST00000385069 95 ntBASIC1.72□□□□□ -2.13
USP11P51784 Y_RNA.681-201ENST00000516445 113 ntBASIC1.72□□□□□ -2.13
USP11P51784 AL359821.1-201ENST00000605519 182 ntBASIC1.72□□□□□ -2.13
USP11P51784 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
USP11P51784 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
USP11P51784 RNU5F-1-201ENST00000362507 117 ntBASIC1.71□□□□□ -2.14
USP11P51784 SNORA67.6-201ENST00000391093 99 ntBASIC1.71□□□□□ -2.14
USP11P51784 RNU1-78P-201ENST00000391248 165 ntBASIC1.71□□□□□ -2.14
USP11P51784 SNORD111-201ENST00000408139 94 ntBASIC1.71□□□□□ -2.14
USP11P51784 MIR2113-201ENST00000459007 91 ntBASIC1.71□□□□□ -2.14
USP11P51784 RNU6-1265P-201ENST00000516342 103 ntBASIC1.71□□□□□ -2.14
USP11P51784 RN7SKP88-201ENST00000516847 250 ntBASIC1.71□□□□□ -2.14
USP11P51784 AC138907.6-201ENST00000568401 126 ntBASIC1.71□□□□□ -2.14
USP11P51784 AC138869.1-201ENST00000568623 124 ntBASIC1.71□□□□□ -2.14
USP11P51784 7SK.8-201ENST00000612110 250 ntBASIC1.71□□□□□ -2.14
USP11P51784 7SK.11-201ENST00000615477 250 ntBASIC1.71□□□□□ -2.14
USP11P51784 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.71□□□□□ -2.14
USP11P51784 7SK.13-201ENST00000622040 250 ntBASIC1.71□□□□□ -2.14
USP11P51784 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.71□□□□□ -2.14
USP11P51784 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
USP11P51784 SNORA24B-201ENST00000384176 131 ntBASIC1.7□□□□□ -2.14
USP11P51784 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
USP11P51784 MIR1323-201ENST00000408090 73 ntBASIC1.7□□□□□ -2.14
USP11P51784 MIR1287-201ENST00000408492 90 ntBASIC1.7□□□□□ -2.14
USP11P51784 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.7□□□□□ -2.14
USP11P51784 RNU6-634P-201ENST00000459134 106 ntBASIC1.7□□□□□ -2.14
USP11P51784 RNU7-21P-201ENST00000459430 62 ntBASIC1.7□□□□□ -2.14
USP11P51784 TRMT112P2-201ENST00000512910 132 ntBASIC1.7□□□□□ -2.14
USP11P51784 SNORA31.24-201ENST00000517232 57 ntBASIC1.7□□□□□ -2.14
USP11P51784 Y_RNA.36-201ENST00000362602 112 ntBASIC1.69□□□□□ -2.14
USP11P51784 RNU6-340P-201ENST00000364005 107 ntBASIC1.69□□□□□ -2.14
USP11P51784 Y_RNA.371-201ENST00000365591 113 ntBASIC1.69□□□□□ -2.14
USP11P51784 RNU6-154P-201ENST00000384306 106 ntBASIC1.69□□□□□ -2.14
USP11P51784 RNU6-535P-201ENST00000384722 107 ntBASIC1.69□□□□□ -2.14
USP11P51784 RNU6-587P-201ENST00000391282 106 ntBASIC1.69□□□□□ -2.14
USP11P51784 MIR1304-201ENST00000408243 91 ntBASIC1.69□□□□□ -2.14
USP11P51784 Y_RNA.596-201ENST00000410462 109 ntBASIC1.69□□□□□ -2.14
USP11P51784 AC008608.1-201ENST00000603910 127 ntBASIC1.69□□□□□ -2.14
USP11P51784 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.69□□□□□ -2.14
USP11P51784 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
USP11P51784 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.68□□□□□ -2.14
USP11P51784 RNU6-540P-201ENST00000384622 101 ntBASIC1.67□□□□□ -2.14
USP11P51784 MIR942-201ENST00000401111 86 ntBASIC1.67□□□□□ -2.14
USP11P51784 RNU6-1052P-201ENST00000411398 104 ntBASIC1.67□□□□□ -2.14
USP11P51784 RNU7-102P-201ENST00000458948 62 ntBASIC1.67□□□□□ -2.14
USP11P51784 RNU7-95P-201ENST00000459222 64 ntBASIC1.67□□□□□ -2.14
USP11P51784 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.67□□□□□ -2.14
USP11P51784 RNU6-871P-201ENST00000516122 100 ntBASIC1.67□□□□□ -2.14
USP11P51784 RNU6-719P-201ENST00000516671 104 ntBASIC1.67□□□□□ -2.14
USP11P51784 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.67□□□□□ -2.14
USP11P51784 AC027335.2-201ENST00000624030 375 ntBASIC1.67□□□□□ -2.14
USP11P51784 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
USP11P51784 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
USP11P51784 RNU6-364P-201ENST00000384387 107 ntBASIC1.66□□□□□ -2.14
USP11P51784 RNU6-1241P-201ENST00000384536 107 ntBASIC1.66□□□□□ -2.14
USP11P51784 MIR320A-201ENST00000385302 82 ntBASIC1.66□□□□□ -2.14
USP11P51784 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USP11P51784 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.66□□□□□ -2.14
USP11P51784 Y_RNA.606-201ENST00000410579 103 ntBASIC1.66□□□□□ -2.14
USP11P51784 AL591704.2-201ENST00000421658 181 ntBASIC1.66□□□□□ -2.14
USP11P51784 AC244505.6-201ENST00000452829 130 ntBASIC1.66□□□□□ -2.14
USP11P51784 MIR4804-201ENST00000581683 73 ntBASIC1.66□□□□□ -2.14
USP11P51784 RNU6-824P-201ENST00000363724 104 ntBASIC1.65□□□□□ -2.15
USP11P51784 RNY4P3-201ENST00000365254 95 ntBASIC1.65□□□□□ -2.15
USP11P51784 SNORD115-31-201ENST00000365318 82 ntBASIC1.65□□□□□ -2.15
USP11P51784 Y_RNA.386-201ENST00000383913 105 ntBASIC1.65□□□□□ -2.15
USP11P51784 RNU6-910P-201ENST00000390844 107 ntBASIC1.65□□□□□ -2.15
USP11P51784 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
USP11P51784 RNU6-935P-201ENST00000410371 100 ntBASIC1.65□□□□□ -2.15
USP11P51784 AL354695.1-201ENST00000427935 228 ntBASIC1.65□□□□□ -2.15
USP11P51784 RNU7-56P-201ENST00000458744 62 ntBASIC1.65□□□□□ -2.15
USP11P51784 RNU6-902P-201ENST00000517212 91 ntBASIC1.65□□□□□ -2.15
USP11P51784 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
USP11P51784 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.65□□□□□ -2.15
USP11P51784 SNORA8.1-201ENST00000384250 140 ntBASIC1.64□□□□□ -2.15
USP11P51784 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
USP11P51784 SNORD79.1-201ENST00000516069 84 ntBASIC1.64□□□□□ -2.15
USP11P51784 SNORA80D-201ENST00000384488 135 ntBASIC1.63□□□□□ -2.15
USP11P51784 MIR451A-201ENST00000385059 72 ntBASIC1.63□□□□□ -2.15
USP11P51784 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.63□□□□□ -2.15
USP11P51784 AC097510.1-201ENST00000510945 133 ntBASIC1.63□□□□□ -2.15
USP11P51784 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.63□□□□□ -2.15
USP11P51784 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
USP11P51784 RNU2-59P-201ENST00000410482 191 ntBASIC1.62□□□□□ -2.15
USP11P51784 RNU6-287P-201ENST00000516230 98 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms