Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.33□□□□□ -2.2
SLC6A11P48066 AC006160.2-201ENST00000637708 154 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.33□□□□□ -2.2
SLC6A11P48066 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SLC6A11P48066 RNU6-228P-201ENST00000362700 106 ntBASIC1.32□□□□□ -2.2
SLC6A11P48066 RNU6-957P-201ENST00000363652 99 ntBASIC1.32□□□□□ -2.2
SLC6A11P48066 Y_RNA.437-201ENST00000384113 113 ntBASIC1.32□□□□□ -2.2
SLC6A11P48066 RNU6-524P-201ENST00000384270 107 ntBASIC1.32□□□□□ -2.2
SLC6A11P48066 RNU7-56P-201ENST00000458744 62 ntBASIC1.32□□□□□ -2.2
SLC6A11P48066 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.32□□□□□ -2.2
SLC6A11P48066 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SLC6A11P48066 MIR96-201ENST00000362288 78 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 Y_RNA.540-201ENST00000384638 111 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 SNORD89-201ENST00000390981 114 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 MIR1236-201ENST00000408340 102 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 AC138907.6-201ENST00000568401 126 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 AC138869.1-201ENST00000568623 124 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 MIR4666B-201ENST00000578142 81 ntBASIC1.31□□□□□ -2.2
SLC6A11P48066 SNORD114-22-201ENST00000365423 72 ntBASIC1.3□□□□□ -2.2
SLC6A11P48066 MIR599-201ENST00000385069 95 ntBASIC1.3□□□□□ -2.2
SLC6A11P48066 MIR520H-201ENST00000385126 88 ntBASIC1.3□□□□□ -2.2
SLC6A11P48066 AC097635.1-201ENST00000450678 155 ntBASIC1.3□□□□□ -2.2
SLC6A11P48066 RNU7-153P-201ENST00000516455 62 ntBASIC1.3□□□□□ -2.2
SLC6A11P48066 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
SLC6A11P48066 RNA5SP245-201ENST00000364239 121 ntBASIC1.29□□□□□ -2.2
SLC6A11P48066 RNU6-787P-201ENST00000384032 107 ntBASIC1.29□□□□□ -2.2
SLC6A11P48066 RNU6-811P-201ENST00000384069 107 ntBASIC1.29□□□□□ -2.2
SLC6A11P48066 AC093729.1-201ENST00000513074 128 ntBASIC1.29□□□□□ -2.2
SLC6A11P48066 RNU6-638P-201ENST00000516582 104 ntBASIC1.29□□□□□ -2.2
SLC6A11P48066 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.29□□□□□ -2.2
SLC6A11P48066 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
SLC6A11P48066 RNU6-1260P-201ENST00000362944 107 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 MIR519A1-201ENST00000385257 85 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 MIR942-201ENST00000401111 86 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 MIR1255A-201ENST00000408338 113 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 Y_RNA.607-201ENST00000410597 98 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 RNA5SP225-201ENST00000410874 135 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 TRDV1-202ENST00000621643 102 ntBASIC1.28□□□□□ -2.2
SLC6A11P48066 MIRLET7F1-201ENST00000362202 87 ntBASIC1.27□□□□□ -2.21
SLC6A11P48066 AL606490.4-201ENST00000423117 127 ntBASIC1.27□□□□□ -2.21
SLC6A11P48066 RNU6-75P-201ENST00000515944 104 ntBASIC1.27□□□□□ -2.21
SLC6A11P48066 AL136317.1-201ENST00000612653 226 ntBASIC1.27□□□□□ -2.21
SLC6A11P48066 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
SLC6A11P48066 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 Y_RNA.313-201ENST00000365095 103 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 RNU6-652P-201ENST00000365488 107 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 MIR548U-201ENST00000390728 81 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 RNA5SP292-201ENST00000390974 118 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 FABP5P4-201ENST00000437203 171 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 AC068338.1-201ENST00000565567 176 ntBASIC1.26□□□□□ -2.21
SLC6A11P48066 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
SLC6A11P48066 Y_RNA.32-201ENST00000362589 110 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 Y_RNA.221-201ENST00000364248 96 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 RNU6-132P-201ENST00000383863 107 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
SLC6A11P48066 RNA5SP395-201ENST00000516567 118 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 SNORA31.14-201ENST00000516728 116 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 MIR4796-201ENST00000580742 81 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 AC104996.3-201ENST00000590718 94 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 MIR6515-201ENST00000619843 57 ntBASIC1.25□□□□□ -2.21
SLC6A11P48066 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
SLC6A11P48066 MIR3064-201ENST00000581130 66 ntBASIC1.24□□□□□ -2.21
SLC6A11P48066 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
SLC6A11P48066 SNORD114-26-201ENST00000363543 72 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 Y_RNA.491-201ENST00000384417 107 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 MIR19B1-201ENST00000384829 87 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 SNORD105-201ENST00000386910 85 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
SLC6A11P48066 SNORA25.13-201ENST00000516395 103 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 RNU6-1110P-201ENST00000516462 101 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 SNORA18.5-201ENST00000516616 101 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 U6.100-201ENST00000636230 99 ntBASIC1.23□□□□□ -2.21
SLC6A11P48066 Y_RNA.174-201ENST00000363781 105 ntBASIC1.22□□□□□ -2.21
SLC6A11P48066 Y_RNA.316-201ENST00000365118 111 ntBASIC1.22□□□□□ -2.21
SLC6A11P48066 RNU6-279P-201ENST00000391297 101 ntBASIC1.22□□□□□ -2.21
SLC6A11P48066 AC140658.3-201ENST00000567603 271 ntBASIC1.22□□□□□ -2.21
SLC6A11P48066 AC022709.1-201ENST00000615967 87 ntBASIC1.22□□□□□ -2.21
SLC6A11P48066 uc_338.16-201ENST00000621804 95 ntBASIC1.22□□□□□ -2.21
SLC6A11P48066 RNA5SP117-201ENST00000365294 118 ntBASIC1.21□□□□□ -2.22
SLC6A11P48066 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
SLC6A11P48066 AC244505.6-201ENST00000452829 130 ntBASIC1.21□□□□□ -2.22
SLC6A11P48066 U7.7-201ENST00000459276 60 ntBASIC1.21□□□□□ -2.22
SLC6A11P48066 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.21□□□□□ -2.22
SLC6A11P48066 RNU1-93P-201ENST00000364704 169 ntBASIC1.2□□□□□ -2.22
SLC6A11P48066 SNORD101-201ENST00000384027 73 ntBASIC1.2□□□□□ -2.22
SLC6A11P48066 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
SLC6A11P48066 MIR150-201ENST00000385048 84 ntBASIC1.2□□□□□ -2.22
SLC6A11P48066 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.2□□□□□ -2.22
SLC6A11P48066 RNU6-1223P-201ENST00000517124 104 ntBASIC1.2□□□□□ -2.22
SLC6A11P48066 MIR6779-201ENST00000617283 64 ntBASIC1.2□□□□□ -2.22
SLC6A11P48066 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
SLC6A11P48066 SNORD115-24-201ENST00000363528 82 ntBASIC1.19□□□□□ -2.22
SLC6A11P48066 Y_RNA.239-201ENST00000364444 113 ntBASIC1.19□□□□□ -2.22
SLC6A11P48066 RNU6-1335P-201ENST00000365426 107 ntBASIC1.19□□□□□ -2.22
SLC6A11P48066 MIR618-201ENST00000385287 98 ntBASIC1.19□□□□□ -2.22
SLC6A11P48066 RNA5SP404-201ENST00000517118 132 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms