Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RNU6-832P-201ENST00000363319 107 ntBASIC0.3□□□□□ -2.36
APOBEC1P41238 RNU6-524P-201ENST00000384270 107 ntBASIC0.3□□□□□ -2.36
APOBEC1P41238 MIR7-2-201ENST00000384970 110 ntBASIC0.3□□□□□ -2.36
APOBEC1P41238 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.3□□□□□ -2.36
APOBEC1P41238 Y_RNA.205-201ENST00000364128 113 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 VTRNA1-3-201ENST00000365645 89 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 SNORD41.1-201ENST00000391000 69 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNU7-13P-201ENST00000516413 62 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 MIR1273G-201ENST00000577677 100 ntBASIC0.29□□□□□ -2.36
APOBEC1P41238 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-1125P-201ENST00000363601 107 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNA5SP205-201ENST00000364653 136 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-1144P-201ENST00000384247 104 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-480P-201ENST00000384332 107 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-476P-201ENST00000384726 107 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-313P-201ENST00000516317 112 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-479P-201ENST00000516348 105 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNA5SP134-201ENST00000516492 96 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 AC141557.1-201ENST00000540982 400 ntBASIC0.28□□□□□ -2.36
APOBEC1P41238 RNU6-1107P-201ENST00000364817 104 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 Y_RNA.323-201ENST00000365157 109 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 Y_RNA.423-201ENST00000384057 113 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 RNU6-1154P-201ENST00000391001 104 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 RNU6-1064P-201ENST00000410626 104 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 Y_RNA.659-201ENST00000515994 113 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 RNU6-789P-201ENST00000517105 102 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 AL162376.1-201ENST00000624117 175 ntBASIC0.27□□□□□ -2.37
APOBEC1P41238 RNU6-834P-201ENST00000362367 110 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 Y_RNA.10-201ENST00000362371 110 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 SNORD36A-201ENST00000362874 73 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 Y_RNA.163-201ENST00000363702 113 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.26□□□□□ -2.37
APOBEC1P41238 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 RNU7-74P-201ENST00000459104 62 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
APOBEC1P41238 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.26□□□□□ -2.37
APOBEC1P41238 RNU4-36P-201ENST00000364294 144 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 RNU6-1163P-201ENST00000364516 107 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 SNORD45B-201ENST00000364617 72 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 SNORA2A-201ENST00000383885 135 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 RNU6-1014P-201ENST00000383940 103 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 RNU6-1056P-201ENST00000383996 107 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 MIR4439-201ENST00000583746 80 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 MIR6779-201ENST00000617283 64 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 MIR6755-201ENST00000619993 66 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 AC073869.9-201ENST00000641610 120 ntBASIC0.25□□□□□ -2.37
APOBEC1P41238 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
APOBEC1P41238 SNORD113-1-201ENST00000365321 69 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 SNORD115-44-201ENST00000365391 82 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 Y_RNA.540-201ENST00000384638 111 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 RNU6-1265P-201ENST00000516342 103 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 SNORA62.5-201ENST00000516634 120 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 MIR3920-201ENST00000581751 86 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 MIR924-201ENST00000638017 53 ntBASIC0.24□□□□□ -2.37
APOBEC1P41238 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 RNU6-509P-201ENST00000363519 107 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 RNU6-269P-201ENST00000391077 97 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 AC109327.2-201ENST00000448339 378 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.23□□□□□ -2.37
APOBEC1P41238 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 MIR4752-201ENST00000579672 72 ntBASIC0.23□□□□□ -2.37
APOBEC1P41238 MIR181B2-201ENST00000385004 89 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 MIR760-201ENST00000390220 80 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 RNU2-51P-201ENST00000410708 197 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 MIR5706-201ENST00000579841 80 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 RNU6-86P-201ENST00000606534 107 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 TRDV1-202ENST00000621643 102 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
APOBEC1P41238 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
APOBEC1P41238 RNU6-1244P-201ENST00000363614 108 ntBASIC0.21□□□□□ -2.38
APOBEC1P41238 Y_RNA.601-201ENST00000410500 113 ntBASIC0.21□□□□□ -2.38
APOBEC1P41238 AL606753.1-201ENST00000427435 87 ntBASIC0.21□□□□□ -2.38
APOBEC1P41238 MIR3613-201ENST00000579844 87 ntBASIC0.21□□□□□ -2.38
APOBEC1P41238 U7.6-201ENST00000610841 64 ntBASIC0.21□□□□□ -2.38
APOBEC1P41238 RNU6-466P-201ENST00000391224 103 ntBASIC0.2□□□□□ -2.38
APOBEC1P41238 RNU4-61P-201ENST00000411243 107 ntBASIC0.2□□□□□ -2.38
APOBEC1P41238 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
APOBEC1P41238 MIR6129-201ENST00000616087 109 ntBASIC0.2□□□□□ -2.38
APOBEC1P41238 Y_RNA.78-201ENST00000362970 110 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 Y_RNA.95-201ENST00000363079 95 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 RNA5SP128-201ENST00000365305 116 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 MIR1302-5-201ENST00000408164 150 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 Y_RNA.596-201ENST00000410462 109 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 RNU7-129P-201ENST00000516128 62 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
APOBEC1P41238 RNU1-29P-201ENST00000606574 126 ntBASIC0.18□□□□□ -2.38
APOBEC1P41238 MIR8087-201ENST00000612745 78 ntBASIC0.18□□□□□ -2.38
APOBEC1P41238 RNU6-957P-201ENST00000363652 99 ntBASIC0.17□□□□□ -2.38
APOBEC1P41238 RNU6-813P-201ENST00000384691 107 ntBASIC0.17□□□□□ -2.38
APOBEC1P41238 MIR617-201ENST00000385030 97 ntBASIC0.17□□□□□ -2.38
APOBEC1P41238 AC006210.1-201ENST00000424882 111 ntBASIC0.17□□□□□ -2.38
APOBEC1P41238 AL161932.1-201ENST00000437408 146 ntBASIC0.17□□□□□ -2.38
APOBEC1P41238 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms