Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SNORA51.5-201ENST00000384126 131 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 MIR590-201ENST00000385008 97 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 MIR599-201ENST00000385069 95 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 AL035461.1-201ENST00000421490 332 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
HOXC8P31273 RNU6-904P-201ENST00000516206 101 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 RNU6-795P-201ENST00000516323 103 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 RNA5SP94-201ENST00000516917 108 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 RNU6-86P-201ENST00000606534 107 ntBASIC0.54□□□□□ -2.32
HOXC8P31273 MIR450A1-201ENST00000362262 91 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 Y_RNA.10-201ENST00000362371 110 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 SNORD115-24-201ENST00000363528 82 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 Y_RNA.221-201ENST00000364248 96 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 RNU6-1229P-201ENST00000364295 107 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 SNORD45B-201ENST00000364617 72 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 RNU6-44P-201ENST00000384045 107 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 Y_RNA.601-201ENST00000410500 113 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 AC244505.6-201ENST00000452829 130 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 Y_RNA.809-201ENST00000516058 95 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 MIR548Z-201ENST00000584743 97 ntBASIC0.53□□□□□ -2.32
HOXC8P31273 Y_RNA.78-201ENST00000362970 110 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 Y_RNA.258-201ENST00000364613 105 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 Y_RNA.467-201ENST00000384297 102 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 AL031737.1-201ENST00000450125 223 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 AC097635.1-201ENST00000450678 155 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 RNU6-135P-201ENST00000516769 101 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 AC012531.4-201ENST00000616509 177 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 AC244669.1-204ENST00000621564 178 ntBASIC0.52□□□□□ -2.33
HOXC8P31273 Y_RNA.95-201ENST00000363079 95 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 RNU6-1244P-201ENST00000363614 108 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 SNORD28-201ENST00000384706 75 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 MIR181B2-201ENST00000385004 89 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 SCARNA23-201ENST00000516060 130 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 RNU6-109P-201ENST00000516364 107 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 RNU6-184P-201ENST00000516514 107 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 MIR4639-201ENST00000584938 69 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.51□□□□□ -2.33
HOXC8P31273 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RNU6-766P-201ENST00000362478 107 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 SNORA36.1-201ENST00000363424 132 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RNA5SP517-201ENST00000364724 117 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RNU6-524P-201ENST00000384270 107 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RNU6-1113P-201ENST00000384348 107 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 MIR519A1-201ENST00000385257 85 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RNU6-1254P-201ENST00000391266 104 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 RNA5SP47-201ENST00000517230 109 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 AC092634.7-201ENST00000621022 103 ntBASIC0.5□□□□□ -2.33
HOXC8P31273 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HOXC8P31273 RNU6-1125P-201ENST00000363601 107 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNU6-755P-201ENST00000364400 103 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNU6-480P-201ENST00000384332 107 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNU6-243P-201ENST00000391140 107 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNU7-104P-201ENST00000459398 79 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNA5SP330-201ENST00000517096 96 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNU6-537P-201ENST00000517277 103 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 RNU7-161P-201ENST00000517289 62 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 MIR4777-201ENST00000583710 86 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 SNORA25.18-201ENST00000607153 114 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
HOXC8P31273 SNORD36A-201ENST00000362874 73 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 RNU6-1260P-201ENST00000362944 107 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 RNA5SP457-201ENST00000363657 124 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 SNORA8.2-201ENST00000384372 139 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 RNA5SP268-201ENST00000516828 124 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 SCARNA16.5-201ENST00000517114 183 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 MIR4439-201ENST00000583746 80 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 AC103810.7-201ENST00000607821 91 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 AC025521.1-201ENST00000621624 286 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 MIR924-201ENST00000638017 53 ntBASIC0.48□□□□□ -2.33
HOXC8P31273 RNU6-716P-201ENST00000365621 103 ntBASIC0.47□□□□□ -2.33
HOXC8P31273 RNU6-813P-201ENST00000384691 107 ntBASIC0.47□□□□□ -2.33
HOXC8P31273 AL161932.1-201ENST00000437408 146 ntBASIC0.47□□□□□ -2.33
HOXC8P31273 RNA5SP227-201ENST00000516184 113 ntBASIC0.47□□□□□ -2.33
HOXC8P31273 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.47□□□□□ -2.33
HOXC8P31273 Y_RNA.107-201ENST00000363190 121 ntBASIC0.46□□□□□ -2.34
HOXC8P31273 RNA5SP403-201ENST00000363598 108 ntBASIC0.46□□□□□ -2.34
HOXC8P31273 MIR548L-201ENST00000408303 86 ntBASIC0.46□□□□□ -2.34
HOXC8P31273 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
HOXC8P31273 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
HOXC8P31273 RNU6-147P-201ENST00000383983 107 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 RNU6-644P-201ENST00000391155 98 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 SNORA40.8-201ENST00000411034 126 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 RNU7-61P-201ENST00000515897 61 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 AL513043.2-201ENST00000573941 143 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 MIR7107-201ENST00000611489 80 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 Y_RNA.818-201ENST00000618813 71 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 AC067863.3-201ENST00000624172 122 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 MIR6828-201ENST00000636181 60 ntBASIC0.45□□□□□ -2.34
HOXC8P31273 RNU6-957P-201ENST00000363652 99 ntBASIC0.44□□□□□ -2.34
HOXC8P31273 Y_RNA.544-201ENST00000384650 113 ntBASIC0.44□□□□□ -2.34
HOXC8P31273 snoU13.11-201ENST00000459219 104 ntBASIC0.44□□□□□ -2.34
HOXC8P31273 Y_RNA.705-201ENST00000516862 110 ntBASIC0.44□□□□□ -2.34
HOXC8P31273 TRDV1-202ENST00000621643 102 ntBASIC0.44□□□□□ -2.34
HOXC8P31273 Y_RNA.93-201ENST00000363066 109 ntBASIC0.43□□□□□ -2.34
HOXC8P31273 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms