Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 MIR548X2-201ENST00000579776 100 ntBASIC0□□□□□ -2.41
COL5A3P25940 MIR3925-201ENST00000584674 77 ntBASIC0□□□□□ -2.41
COL5A3P25940 RNU1-29P-201ENST00000606574 126 ntBASIC0□□□□□ -2.41
COL5A3P25940 RNU6-363P-201ENST00000362895 105 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-804P-201ENST00000384286 107 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 SNORD110-201ENST00000408189 75 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-426P-201ENST00000516464 97 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MTND5P41-201ENST00000517498 206 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 AP001328.1-201ENST00000528550 176 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MIR3920-201ENST00000581751 86 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 uc_338.28-201ENST00000612082 187 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 SNORD115-19-201ENST00000363098 82 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 SNORD115-18-201ENST00000363293 82 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 SNORD115-17-201ENST00000364612 82 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 SNORD114-12-201ENST00000365400 75 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-80P-201ENST00000384195 107 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MIR548H2-201ENST00000408874 88 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU4-63P-201ENST00000411313 118 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-1234P-201ENST00000516877 103 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-850P-201ENST00000516934 103 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MIR4752-201ENST00000579672 72 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MIR3671-201ENST00000580455 88 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MIR3163-201ENST00000581592 73 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 MIR548AD-201ENST00000584780 82 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 AC090425.1-201ENST00000610007 140 ntBASIC-0.01□□□□□ -2.41
COL5A3P25940 RNU6-1260P-201ENST00000362944 107 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 RNU6-302P-201ENST00000365249 107 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 SNORD116-18-201ENST00000383961 92 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 RNU6-409P-201ENST00000384114 104 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 MIR617-201ENST00000385030 97 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 MIR516B1-201ENST00000385211 90 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 MIR4290-201ENST00000583807 95 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 AC025166.1-201ENST00000612411 163 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 AL442128.1-201ENST00000615151 90 ntBASIC-0.02□□□□□ -2.41
COL5A3P25940 RNU6-235P-201ENST00000362644 107 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNA5SP403-201ENST00000363598 108 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU6-571P-201ENST00000384128 107 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 SNORD38.2-201ENST00000384470 69 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU6-243P-201ENST00000391140 107 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU7-104P-201ENST00000459398 79 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU7-129P-201ENST00000516128 62 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU6-287P-201ENST00000516230 98 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.03□□□□□ -2.41
COL5A3P25940 MIR4743-201ENST00000584576 69 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 SNORA70.25-201ENST00000612741 95 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 FTX_2.1-201ENST00000618816 94 ntBASIC-0.03□□□□□ -2.41
COL5A3P25940 RNU4-32P-201ENST00000363404 141 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6V-201ENST00000384105 107 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6-886P-201ENST00000384319 105 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 MTND4LP9-201ENST00000427694 174 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 AC097635.1-201ENST00000450678 155 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU7-74P-201ENST00000459104 62 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6-180P-201ENST00000516697 61 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6-664P-201ENST00000362381 107 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6-170P-201ENST00000362832 104 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 MIR501-201ENST00000390204 84 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 RNU6-907P-201ENST00000390924 102 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 SNORA7.5-201ENST00000410672 110 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 SPINT5P-201ENST00000448174 155 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.04□□□□□ -2.42
COL5A3P25940 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 MIR4677-201ENST00000584153 80 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 U7.2-201ENST00000607576 63 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 U4.2-201ENST00000618561 85 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.04□□□□□ -2.42
COL5A3P25940 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
COL5A3P25940 MTND5P18-201ENST00000445624 1801 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 SNORA42.1-201ENST00000363515 137 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 MIR34C-201ENST00000384831 77 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 MIR577-201ENST00000385196 96 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 RNU6-127P-201ENST00000390897 107 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 RNA5SP163-201ENST00000410304 99 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 RNU7-159P-201ENST00000459284 62 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 RNU6-781P-201ENST00000516377 101 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.05□□□□□ -2.42
COL5A3P25940 SNORD114-5-201ENST00000362928 70 ntBASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 225.5 ms