Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RNU4-62P-201ENST00000410125 130 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 SNORA40.8-201ENST00000411034 126 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 RNU7-161P-201ENST00000517289 62 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 AC018659.1-201ENST00000551083 169 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 MIR6504-201ENST00000613520 61 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 AL353770.2-201ENST00000620024 78 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 TRDV1-202ENST00000621643 102 ntBASIC0.86□□□□□ -2.27
VAMP1P23763 SNORD116-10-201ENST00000363791 102 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 RNU6-153P-201ENST00000364422 104 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 RNA5SP517-201ENST00000364724 117 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 SNORA8.2-201ENST00000384372 139 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 MTATP8P2-201ENST00000435212 202 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 Y_RNA.648-201ENST00000459455 110 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 SNORD114-21-201ENST00000606412 72 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 AP001318.4-201ENST00000616637 121 ntBASIC0.85□□□□□ -2.27
VAMP1P23763 snoU13.18-201ENST00000459483 104 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 RNU6-162P-201ENST00000516228 103 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 RNA5SP220-201ENST00000516298 104 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 RNU4-54P-201ENST00000516428 129 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 RNU6-158P-201ENST00000517104 100 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 SNORA25.18-201ENST00000607153 114 ntBASIC0.84□□□□□ -2.27
VAMP1P23763 RNU6-42P-201ENST00000384165 107 ntBASIC0.83□□□□□ -2.28
VAMP1P23763 RNU6-519P-201ENST00000410590 108 ntBASIC0.83□□□□□ -2.28
VAMP1P23763 MIR4536-1-201ENST00000583537 88 ntBASIC0.83□□□□□ -2.28
VAMP1P23763 RNA5SP403-201ENST00000363598 108 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 RNU6-957P-201ENST00000363652 99 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 snoU13.11-201ENST00000459219 104 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 RNU6-168P-201ENST00000516189 101 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 U7.3-201ENST00000616123 62 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 MIR8070-201ENST00000616510 88 ntBASIC0.82□□□□□ -2.28
VAMP1P23763 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
VAMP1P23763 Y_RNA.191-201ENST00000363972 113 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 SNORD115-44-201ENST00000365391 82 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 SNORD58A-201ENST00000383875 65 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 Y_RNA.466-201ENST00000384294 113 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 AL161932.1-201ENST00000437408 146 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 RNU7-74P-201ENST00000459104 62 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 RNU6-1057P-201ENST00000517162 102 ntBASIC0.81□□□□□ -2.28
VAMP1P23763 SNORA36.1-201ENST00000363424 132 ntBASIC0.8□□□□□ -2.28
VAMP1P23763 Y_RNA.283-201ENST00000364798 112 ntBASIC0.8□□□□□ -2.28
VAMP1P23763 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.8□□□□□ -2.28
VAMP1P23763 AL078603.1-201ENST00000603824 313 ntBASIC0.8□□□□□ -2.28
VAMP1P23763 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.8□□□□□ -2.28
VAMP1P23763 RNU4-38P-201ENST00000364472 129 ntBASIC0.79□□□□□ -2.28
VAMP1P23763 Y_RNA.508-201ENST00000384502 114 ntBASIC0.79□□□□□ -2.28
VAMP1P23763 Y_RNA.596-201ENST00000410462 109 ntBASIC0.79□□□□□ -2.28
VAMP1P23763 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
VAMP1P23763 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.79□□□□□ -2.28
VAMP1P23763 MIR518A1-201ENST00000385068 85 ntBASIC0.78□□□□□ -2.28
VAMP1P23763 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
VAMP1P23763 RN7SKP12-201ENST00000516275 143 ntBASIC0.77□□□□□ -2.29
VAMP1P23763 MIR4452-201ENST00000583004 71 ntBASIC0.77□□□□□ -2.29
VAMP1P23763 MIR7107-201ENST00000611489 80 ntBASIC0.77□□□□□ -2.29
VAMP1P23763 MIR1276-201ENST00000408707 83 ntBASIC0.76□□□□□ -2.29
VAMP1P23763 RNA5SP89-201ENST00000410300 108 ntBASIC0.76□□□□□ -2.29
VAMP1P23763 RNU6-1265P-201ENST00000516342 103 ntBASIC0.76□□□□□ -2.29
VAMP1P23763 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
VAMP1P23763 Y_RNA.224-201ENST00000364308 111 ntBASIC0.75□□□□□ -2.29
VAMP1P23763 RNU6-726P-201ENST00000364680 107 ntBASIC0.75□□□□□ -2.29
VAMP1P23763 SNORD101-201ENST00000384027 73 ntBASIC0.75□□□□□ -2.29
VAMP1P23763 SNORD118-201ENST00000363593 134 ntBASIC0.74□□□□□ -2.29
VAMP1P23763 Y_RNA.220-201ENST00000364244 109 ntBASIC0.74□□□□□ -2.29
VAMP1P23763 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.74□□□□□ -2.29
VAMP1P23763 RNU6-509P-201ENST00000363519 107 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 Y_RNA.239-201ENST00000364444 113 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 Y_RNA.348-201ENST00000365403 103 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 Y_RNA.355-201ENST00000365462 98 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 MIR548U-201ENST00000390728 81 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 MIR6857-201ENST00000613267 93 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 U6.100-201ENST00000636230 99 ntBASIC0.73□□□□□ -2.29
VAMP1P23763 MIR520E-201ENST00000384867 87 ntBASIC0.72□□□□□ -2.29
VAMP1P23763 Y_RNA.609-201ENST00000410669 89 ntBASIC0.72□□□□□ -2.29
VAMP1P23763 MIR3920-201ENST00000581751 86 ntBASIC0.72□□□□□ -2.29
VAMP1P23763 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.72□□□□□ -2.29
VAMP1P23763 MIR6734-201ENST00000621166 68 ntBASIC0.72□□□□□ -2.29
VAMP1P23763 RNU2-59P-201ENST00000410482 191 ntBASIC0.71□□□□□ -2.3
VAMP1P23763 RNA5SP102-201ENST00000516865 106 ntBASIC0.71□□□□□ -2.3
VAMP1P23763 MALAT1.1-201ENST00000618249 95 ntBASIC0.71□□□□□ -2.3
VAMP1P23763 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
VAMP1P23763 Y_RNA.118-201ENST00000363300 101 ntBASIC0.7□□□□□ -2.3
VAMP1P23763 SNORD41.1-201ENST00000391000 69 ntBASIC0.7□□□□□ -2.3
VAMP1P23763 RNU6-664P-201ENST00000362381 107 ntBASIC0.69□□□□□ -2.3
VAMP1P23763 Y_RNA.290-201ENST00000364879 114 ntBASIC0.69□□□□□ -2.3
VAMP1P23763 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
VAMP1P23763 RNU6-287P-201ENST00000516230 98 ntBASIC0.69□□□□□ -2.3
VAMP1P23763 AC073869.9-201ENST00000641610 120 ntBASIC0.69□□□□□ -2.3
VAMP1P23763 RNY4P30-201ENST00000410216 95 ntBASIC0.68□□□□□ -2.3
VAMP1P23763 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
VAMP1P23763 AC069271.1-201ENST00000445577 156 ntBASIC0.68□□□□□ -2.3
VAMP1P23763 RNU6-351P-201ENST00000516097 100 ntBASIC0.68□□□□□ -2.3
VAMP1P23763 RNU6-1223P-201ENST00000517124 104 ntBASIC0.68□□□□□ -2.3
VAMP1P23763 Y_RNA.190-201ENST00000363964 101 ntBASIC0.67□□□□□ -2.3
VAMP1P23763 RNU6-1126P-201ENST00000384002 107 ntBASIC0.67□□□□□ -2.3
VAMP1P23763 Y_RNA.423-201ENST00000384057 113 ntBASIC0.67□□□□□ -2.3
VAMP1P23763 MIR2113-201ENST00000459007 91 ntBASIC0.67□□□□□ -2.3
VAMP1P23763 SNORD4B-201ENST00000459083 72 ntBASIC0.67□□□□□ -2.3
VAMP1P23763 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.67□□□□□ -2.3
VAMP1P23763 RNU4-32P-201ENST00000363404 141 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 214.7 ms