Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU7-85P-201ENST00000458851 63 ntBASIC1.18□□□□□ -2.22
COL6A2P12110 AC002350.1-201ENST00000490759 375 ntBASIC1.18□□□□□ -2.22
COL6A2P12110 RNA5SP255-201ENST00000516370 107 ntBASIC1.18□□□□□ -2.22
COL6A2P12110 SNORA26.2-201ENST00000390922 122 ntBASIC1.17□□□□□ -2.22
COL6A2P12110 RNY4P29-201ENST00000410801 97 ntBASIC1.17□□□□□ -2.22
COL6A2P12110 snoU13.11-201ENST00000459219 104 ntBASIC1.17□□□□□ -2.22
COL6A2P12110 AC062037.1-201ENST00000605302 128 ntBASIC1.17□□□□□ -2.22
COL6A2P12110 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
COL6A2P12110 IGLL4P-201ENST00000614590 133 ntBASIC1.16□□□□□ -2.22
COL6A2P12110 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.16□□□□□ -2.22
COL6A2P12110 Y_RNA.32-201ENST00000362589 110 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 RNY1P1-201ENST00000364372 112 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 Y_RNA.283-201ENST00000364798 112 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 RNU6-1152P-201ENST00000384576 107 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 MIR599-201ENST00000385069 95 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 RNU6-466P-201ENST00000391224 103 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 RN7SKP12-201ENST00000516275 143 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 SNORA31.14-201ENST00000516728 116 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.15□□□□□ -2.23
COL6A2P12110 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.15□□□□□ -2.23
COL6A2P12110 RNU6-509P-201ENST00000363519 107 ntBASIC1.14□□□□□ -2.23
COL6A2P12110 RNU6-75P-201ENST00000515944 104 ntBASIC1.14□□□□□ -2.23
COL6A2P12110 RNU6-267P-201ENST00000516714 103 ntBASIC1.14□□□□□ -2.23
COL6A2P12110 MIR4536-1-201ENST00000583537 88 ntBASIC1.14□□□□□ -2.23
COL6A2P12110 SNORD114-26-201ENST00000363543 72 ntBASIC1.13□□□□□ -2.23
COL6A2P12110 RNU6-957P-201ENST00000363652 99 ntBASIC1.13□□□□□ -2.23
COL6A2P12110 RNA5SP117-201ENST00000365294 118 ntBASIC1.13□□□□□ -2.23
COL6A2P12110 Y_RNA.388-201ENST00000383919 113 ntBASIC1.13□□□□□ -2.23
COL6A2P12110 RNU6-135P-201ENST00000516769 101 ntBASIC1.13□□□□□ -2.23
COL6A2P12110 AC022709.1-201ENST00000615967 87 ntBASIC1.13□□□□□ -2.23
COL6A2P12110 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A2P12110 MIR573-201ENST00000384964 99 ntBASIC1.12□□□□□ -2.23
COL6A2P12110 RNU6-65P-201ENST00000516332 98 ntBASIC1.12□□□□□ -2.23
COL6A2P12110 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.12□□□□□ -2.23
COL6A2P12110 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
COL6A2P12110 MIR494-201ENST00000349529 81 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 MIR96-201ENST00000362288 78 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 RNU6-1335P-201ENST00000365426 107 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
COL6A2P12110 RNU6-524P-201ENST00000384270 107 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 MIR6779-201ENST00000617283 64 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 MIR6515-201ENST00000619843 57 ntBASIC1.11□□□□□ -2.23
COL6A2P12110 MIR519C-201ENST00000385053 87 ntBASIC1.1□□□□□ -2.23
COL6A2P12110 MIR1236-201ENST00000408340 102 ntBASIC1.1□□□□□ -2.23
COL6A2P12110 RNU6-1265P-201ENST00000516342 103 ntBASIC1.1□□□□□ -2.23
COL6A2P12110 MTRNR2L2-201ENST00000604882 87 ntBASIC1.1□□□□□ -2.23
COL6A2P12110 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.1□□□□□ -2.23
COL6A2P12110 TRDV1-202ENST00000621643 102 ntBASIC1.1□□□□□ -2.23
COL6A2P12110 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL6A2P12110 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
COL6A2P12110 RNA5SP325-201ENST00000363756 130 ntBASIC1.09□□□□□ -2.23
COL6A2P12110 RNU6-979P-201ENST00000383896 107 ntBASIC1.09□□□□□ -2.23
COL6A2P12110 MIR548BB-201ENST00000626714 66 ntBASIC1.09□□□□□ -2.23
COL6A2P12110 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A2P12110 SNORD115-27-201ENST00000364430 82 ntBASIC1.08□□□□□ -2.24
COL6A2P12110 RNU1-93P-201ENST00000364704 169 ntBASIC1.08□□□□□ -2.24
COL6A2P12110 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL6A2P12110 AC022137.1-201ENST00000483735 151 ntBASIC1.08□□□□□ -2.24
COL6A2P12110 MIR5588-201ENST00000581890 63 ntBASIC1.08□□□□□ -2.24
COL6A2P12110 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.08□□□□□ -2.24
COL6A2P12110 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL6A2P12110 RNA5SP403-201ENST00000363598 108 ntBASIC1.07□□□□□ -2.24
COL6A2P12110 AL606490.4-201ENST00000423117 127 ntBASIC1.07□□□□□ -2.24
COL6A2P12110 MIR3612-201ENST00000579753 87 ntBASIC1.07□□□□□ -2.24
COL6A2P12110 MIR4661-201ENST00000582720 75 ntBASIC1.07□□□□□ -2.24
COL6A2P12110 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
COL6A2P12110 Y_RNA.73-201ENST00000362910 113 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 Y_RNA.221-201ENST00000364248 96 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 SNORD99-201ENST00000408612 74 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A2P12110 RNU7-171P-201ENST00000459581 62 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A2P12110 AC093729.1-201ENST00000513074 128 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.06□□□□□ -2.24
COL6A2P12110 MIR4639-201ENST00000584938 69 ntBASIC1.06□□□□□ -2.24
COL6A2P12110 SNORD115-24-201ENST00000363528 82 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 RNU4-45P-201ENST00000365469 141 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 Y_RNA.426-201ENST00000384068 113 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 RNU6-811P-201ENST00000384069 107 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 MIR644A-201ENST00000385262 94 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 MIR548U-201ENST00000390728 81 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 Y_RNA.596-201ENST00000410462 109 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 AC244098.3-201ENST00000424803 96 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 RNU6-1223P-201ENST00000517124 104 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 MIR3064-201ENST00000581130 66 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 MIR4295-201ENST00000585286 85 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 AC006160.2-201ENST00000637708 154 ntBASIC1.05□□□□□ -2.24
COL6A2P12110 RNU6-664P-201ENST00000362381 107 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 Y_RNA.36-201ENST00000362602 112 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 RNU4-32P-201ENST00000363404 141 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 RNA5SP173-201ENST00000364857 136 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 RNU6-242P-201ENST00000384359 107 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 Y_RNA.611-201ENST00000410682 108 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 RPS29P1-201ENST00000465274 159 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 RNU6-469P-201ENST00000516253 101 ntBASIC1.04□□□□□ -2.24
COL6A2P12110 RNU7-161P-201ENST00000517289 62 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 291 ms