Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 Y_RNA.697-201ENST00000516776 113 ntBASIC0.73□□□□□ -2.29
COL5A2P05997 RNU6-850P-201ENST00000516934 103 ntBASIC0.73□□□□□ -2.29
COL5A2P05997 MIR5582-201ENST00000579697 68 ntBASIC0.73□□□□□ -2.29
COL5A2P05997 U7.3-201ENST00000616123 62 ntBASIC0.73□□□□□ -2.29
COL5A2P05997 MIR8066-201ENST00000617280 78 ntBASIC0.73□□□□□ -2.29
COL5A2P05997 RNU6-1335P-201ENST00000365426 107 ntBASIC0.72□□□□□ -2.29
COL5A2P05997 MIR488-201ENST00000365739 83 ntBASIC0.72□□□□□ -2.29
COL5A2P05997 RNU6-813P-201ENST00000384691 107 ntBASIC0.72□□□□□ -2.29
COL5A2P05997 MIR516A2-201ENST00000384888 90 ntBASIC0.72□□□□□ -2.29
COL5A2P05997 MIR516A1-201ENST00000385033 90 ntBASIC0.72□□□□□ -2.29
COL5A2P05997 MIR2052-201ENST00000636055 55 ntBASIC0.72□□□□□ -2.29
COL5A2P05997 Y_RNA.57-201ENST00000362806 113 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 RNU6-35P-201ENST00000384530 107 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 RNU6-535P-201ENST00000384722 107 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 MIR635-201ENST00000384830 98 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 RNU7-106P-201ENST00000459514 67 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 SNORD92-201ENST00000585078 85 ntBASIC0.71□□□□□ -2.3
COL5A2P05997 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL5A2P05997 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
COL5A2P05997 Y_RNA.173-201ENST00000363776 113 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 RNA5SP245-201ENST00000364239 121 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 VTRNA1-3-201ENST00000365645 89 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 RNU6-49P-201ENST00000384256 107 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 SNORD100-201ENST00000408573 76 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 TRAJ51-201ENST00000504127 63 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 Y_RNA.705-201ENST00000516862 110 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 AC243829.6-201ENST00000612652 106 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 AC025521.1-201ENST00000621624 286 ntBASIC0.7□□□□□ -2.3
COL5A2P05997 HSBP1P2-201ENST00000299671 229 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 RNU6-1255P-201ENST00000363434 112 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 Y_RNA.290-201ENST00000364879 114 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 Y_RNA.342-201ENST00000365352 113 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 SNORD58A-201ENST00000383875 65 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 Y_RNA.536-201ENST00000384621 113 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 MIR1827-201ENST00000408549 66 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 AL606490.4-201ENST00000423117 127 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 FABP5P4-201ENST00000437203 171 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 MALAT1.1-201ENST00000618249 95 ntBASIC0.69□□□□□ -2.3
COL5A2P05997 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
COL5A2P05997 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
COL5A2P05997 RNU6-1125P-201ENST00000363601 107 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 RNU6-480P-201ENST00000384332 107 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 SNORD105-201ENST00000386910 85 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 RNU6-972P-201ENST00000391208 107 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 RNU6-887P-201ENST00000410660 100 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 SNORD63B-201ENST00000411005 70 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 U7.7-201ENST00000459276 60 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 AL513043.2-201ENST00000573941 143 ntBASIC0.68□□□□□ -2.3
COL5A2P05997 RNU6-1244P-201ENST00000363614 108 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 Y_RNA.220-201ENST00000364244 109 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNU7-195P-201ENST00000458793 62 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNU6-448P-201ENST00000517052 107 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 MIR4661-201ENST00000582720 75 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 SNORD114-24-201ENST00000365029 72 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNA5SP117-201ENST00000365294 118 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNU6-571P-201ENST00000384128 107 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNU6-291P-201ENST00000384720 107 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 MIR200A-201ENST00000384875 90 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 RNU6-243P-201ENST00000391140 107 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 Y_RNA.694-201ENST00000516677 117 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 MIR4439-201ENST00000583746 80 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 AL136317.1-201ENST00000612653 226 ntBASIC0.67□□□□□ -2.3
COL5A2P05997 Y_RNA.56-201ENST00000362798 112 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 RNU1-124P-201ENST00000363861 145 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 RNU6-294P-201ENST00000364999 102 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 MIR644A-201ENST00000385262 94 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 SNORD99-201ENST00000408612 74 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 AL161932.1-201ENST00000437408 146 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 SNRPGP12-201ENST00000449481 213 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 SNORA31.14-201ENST00000516728 116 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 RNU6-765P-201ENST00000516916 99 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 AC011195.1-201ENST00000578177 177 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 MIR548H5-201ENST00000580314 60 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 AL627230.5-201ENST00000619807 58 ntBASIC0.66□□□□□ -2.3
COL5A2P05997 SNORD36A-201ENST00000362874 73 ntBASIC0.65□□□□□ -2.31
COL5A2P05997 Y_RNA.221-201ENST00000364248 96 ntBASIC0.65□□□□□ -2.31
COL5A2P05997 MIR92A1-201ENST00000385233 78 ntBASIC0.65□□□□□ -2.31
COL5A2P05997 snoU13.11-201ENST00000459219 104 ntBASIC0.65□□□□□ -2.31
COL5A2P05997 ACA64.5-201ENST00000516207 127 ntBASIC0.65□□□□□ -2.31
COL5A2P05997 AC026421.1-201ENST00000519101 163 ntBASIC0.65□□□□□ -2.31
COL5A2P05997 Y_RNA.43-201ENST00000362670 111 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 RNU6-1134P-201ENST00000365156 101 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 RNU6-1254P-201ENST00000391266 104 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 Y_RNA.609-201ENST00000410669 89 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 AC002350.1-201ENST00000490759 375 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 RNU6-844P-201ENST00000517175 102 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 AC006254.2-201ENST00000603259 279 ntBASIC0.64□□□□□ -2.31
COL5A2P05997 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.64□□□□□ -2.31
COL5A2P05997 Y_RNA.96-201ENST00000363092 109 ntBASIC0.63□□□□□ -2.31
COL5A2P05997 Y_RNA.809-201ENST00000516058 95 ntBASIC0.63□□□□□ -2.31
COL5A2P05997 RNU6-158P-201ENST00000517104 100 ntBASIC0.63□□□□□ -2.31
COL5A2P05997 AC138869.1-201ENST00000568623 124 ntBASIC0.63□□□□□ -2.31
COL5A2P05997 uc_338.16-201ENST00000621804 95 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms