Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TOP3BO95985 SNORD78.1-201ENST00000390866 65 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 RNU6-1275P-201ENST00000391087 107 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 Y_RNA.611-201ENST00000410682 108 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 RNU6-1194P-201ENST00000516208 104 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 RNA5SP121-201ENST00000516537 101 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 AC013244.2-201ENST00000603396 103 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 MIR6082-201ENST00000613604 109 ntBASIC1.12□□□□□ -2.23
TOP3BO95985 RNA5SP257-201ENST00000363023 116 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 Y_RNA.426-201ENST00000384068 113 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 MIR125B2-201ENST00000385128 89 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 RPS26P5-201ENST00000418544 335 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 RNU7-171P-201ENST00000459581 62 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 RNU6-765P-201ENST00000516916 99 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 MIR3202-2-201ENST00000635980 79 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 AC006160.2-201ENST00000637708 154 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 MIR924-201ENST00000638017 53 ntBASIC1.11□□□□□ -2.23
TOP3BO95985 MIR101-2-201ENST00000362195 79 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 RNU6-228P-201ENST00000362700 106 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 SNORD36A-201ENST00000362874 73 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 RNU6-1124P-201ENST00000384169 107 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 RNU6-1254P-201ENST00000391266 104 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 SNORD100-201ENST00000408573 76 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 SNORD63B-201ENST00000411005 70 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 RNU7-85P-201ENST00000458851 63 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 SNORD4B-201ENST00000459083 72 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 Y_RNA.648-201ENST00000459455 110 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 Y_RNA.685-201ENST00000516532 108 ntBASIC1.1□□□□□ -2.23
TOP3BO95985 Y_RNA.42-201ENST00000362660 108 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 RNA5SP62-201ENST00000363457 110 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 RNU6-787P-201ENST00000384032 107 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 MIR519C-201ENST00000385053 87 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 RNU6-243P-201ENST00000391140 107 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 snoU13.11-201ENST00000459219 104 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 RNU7-106P-201ENST00000459514 67 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 MIR4676-201ENST00000583078 72 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 AC211469.2-201ENST00000605461 205 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 AL627230.5-201ENST00000619807 58 ntBASIC1.09□□□□□ -2.23
TOP3BO95985 RNU6-369P-201ENST00000362515 102 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TOP3BO95985 Y_RNA.536-201ENST00000384621 113 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 RNU6-994P-201ENST00000410507 111 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 TRAJ51-201ENST00000504127 63 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 RNU7-156P-201ENST00000517214 74 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 CYP3A137P-201ENST00000562436 69 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 MIR4666B-201ENST00000578142 81 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 MIR3973-201ENST00000579824 107 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 MIR548H5-201ENST00000580314 60 ntBASIC1.08□□□□□ -2.24
TOP3BO95985 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TOP3BO95985 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TOP3BO95985 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
TOP3BO95985 Y_RNA.56-201ENST00000362798 112 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 RNU6-524P-201ENST00000384270 107 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 MIR635-201ENST00000384830 98 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TOP3BO95985 AC098934.3-201ENST00000430450 190 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 SNORD92-201ENST00000585078 85 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 RNU7-10P-201ENST00000607194 63 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 AL109933.3-201ENST00000619095 188 ntBASIC1.07□□□□□ -2.24
TOP3BO95985 RNU4-32P-201ENST00000363404 141 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 Y_RNA.283-201ENST00000364798 112 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 Y_RNA.437-201ENST00000384113 113 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 RNU6-364P-201ENST00000384387 107 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 MIR519A1-201ENST00000385257 85 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 MIR938-201ENST00000401216 83 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 MIR1255A-201ENST00000408338 113 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 Y_RNA.607-201ENST00000410597 98 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 RNA5SP225-201ENST00000410874 135 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 AC092628.1-201ENST00000436250 252 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 RNU7-195P-201ENST00000458793 62 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 Y_RNA.697-201ENST00000516776 113 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 RNA5SP404-201ENST00000517118 132 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 SNORD114-21-201ENST00000606412 72 ntBASIC1.06□□□□□ -2.24
TOP3BO95985 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
TOP3BO95985 RNU7-102P-201ENST00000458948 62 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 AC093729.1-201ENST00000513074 128 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 RNU6-75P-201ENST00000515944 104 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 RNU6-638P-201ENST00000516582 104 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 RNU6-448P-201ENST00000517052 107 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 MIR4536-1-201ENST00000583537 88 ntBASIC1.05□□□□□ -2.24
TOP3BO95985 SNORD115-37-201ENST00000363768 82 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 Y_RNA.313-201ENST00000365095 103 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 MIR100-201ENST00000385259 80 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 RNU6-466P-201ENST00000391224 103 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 MIR1236-201ENST00000408340 102 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 RNU6-65P-201ENST00000516332 98 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 RNU6-977P-201ENST00000516411 103 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 RNU7-153P-201ENST00000516455 62 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 MIR4804-201ENST00000581683 73 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
TOP3BO95985 MIR1-1-201ENST00000362147 71 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 RNU6-1260P-201ENST00000362944 107 ntBASIC1.03□□□□□ -2.24
TOP3BO95985 RNU6-35P-201ENST00000384530 107 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 239.4 ms