Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 Y_RNA.221-201ENST00000364248 96 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 SNORD58A-201ENST00000383875 65 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 RNU6-466P-201ENST00000391224 103 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 RNU6-1265P-201ENST00000516342 103 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 RNA5SP47-201ENST00000517230 109 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 AC244669.1-204ENST00000621564 178 ntBASIC0.83□□□□□ -2.28
KDM1AO60341 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.83□□□□□ -2.28
KDM1AO60341 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KDM1AO60341 RNA5SP403-201ENST00000363598 108 ntBASIC0.82□□□□□ -2.28
KDM1AO60341 RNU6-162P-201ENST00000516228 103 ntBASIC0.82□□□□□ -2.28
KDM1AO60341 SCARNA16.5-201ENST00000517114 183 ntBASIC0.82□□□□□ -2.28
KDM1AO60341 RNU7-161P-201ENST00000517289 62 ntBASIC0.82□□□□□ -2.28
KDM1AO60341 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.82□□□□□ -2.28
KDM1AO60341 MALAT1.1-201ENST00000618249 95 ntBASIC0.82□□□□□ -2.28
KDM1AO60341 RNU1-93P-201ENST00000364704 169 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 Y_RNA.290-201ENST00000364879 114 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 snoU13.11-201ENST00000459219 104 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 RNU7-104P-201ENST00000459398 79 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 MIR4452-201ENST00000583004 71 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 TRDV1-202ENST00000621643 102 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 MIR6866-201ENST00000638146 69 ntBASIC0.81□□□□□ -2.28
KDM1AO60341 RNU6-957P-201ENST00000363652 99 ntBASIC0.79□□□□□ -2.28
KDM1AO60341 Y_RNA.283-201ENST00000364798 112 ntBASIC0.79□□□□□ -2.28
KDM1AO60341 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
KDM1AO60341 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.79□□□□□ -2.28
KDM1AO60341 MIR96-201ENST00000362288 78 ntBASIC0.78□□□□□ -2.28
KDM1AO60341 AL590095.2-201ENST00000604136 117 ntBASIC0.78□□□□□ -2.28
KDM1AO60341 MIR6828-201ENST00000636181 60 ntBASIC0.78□□□□□ -2.28
KDM1AO60341 SNORA36.1-201ENST00000363424 132 ntBASIC0.77□□□□□ -2.29
KDM1AO60341 SNORD114-22-201ENST00000365423 72 ntBASIC0.77□□□□□ -2.29
KDM1AO60341 MIR488-201ENST00000365739 83 ntBASIC0.77□□□□□ -2.29
KDM1AO60341 AL161932.1-201ENST00000437408 146 ntBASIC0.77□□□□□ -2.29
KDM1AO60341 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.77□□□□□ -2.29
KDM1AO60341 Y_RNA.694-201ENST00000516677 117 ntBASIC0.77□□□□□ -2.29
KDM1AO60341 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
KDM1AO60341 RNU7-13P-201ENST00000516413 62 ntBASIC0.76□□□□□ -2.29
KDM1AO60341 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
KDM1AO60341 AC092634.7-201ENST00000621022 103 ntBASIC0.76□□□□□ -2.29
KDM1AO60341 AC067863.3-201ENST00000624172 122 ntBASIC0.76□□□□□ -2.29
KDM1AO60341 MIR6767-201ENST00000637302 66 ntBASIC0.76□□□□□ -2.29
KDM1AO60341 Y_RNA.220-201ENST00000364244 109 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 RNA5SP517-201ENST00000364724 117 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 SNORA8.2-201ENST00000384372 139 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 MIR548L-201ENST00000408303 86 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 RNU6-519P-201ENST00000410590 108 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 RNU7-85P-201ENST00000458851 63 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 RNA5SP227-201ENST00000516184 113 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 RNA5SP268-201ENST00000516828 124 ntBASIC0.75□□□□□ -2.29
KDM1AO60341 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
KDM1AO60341 Y_RNA.224-201ENST00000364308 111 ntBASIC0.74□□□□□ -2.29
KDM1AO60341 RNA5SP247-201ENST00000411181 105 ntBASIC0.74□□□□□ -2.29
KDM1AO60341 RNU6-65P-201ENST00000516332 98 ntBASIC0.74□□□□□ -2.29
KDM1AO60341 U6.100-201ENST00000636230 99 ntBASIC0.74□□□□□ -2.29
KDM1AO60341 Y_RNA.190-201ENST00000363964 101 ntBASIC0.73□□□□□ -2.29
KDM1AO60341 Y_RNA.226-201ENST00000364337 114 ntBASIC0.73□□□□□ -2.29
KDM1AO60341 SNORD115-44-201ENST00000365391 82 ntBASIC0.73□□□□□ -2.29
KDM1AO60341 MIR520E-201ENST00000384867 87 ntBASIC0.73□□□□□ -2.29
KDM1AO60341 MIR1287-201ENST00000408492 90 ntBASIC0.73□□□□□ -2.29
KDM1AO60341 MIR6835-201ENST00000621552 64 ntBASIC0.73□□□□□ -2.29
KDM1AO60341 RNU6-726P-201ENST00000364680 107 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 RNU6-716P-201ENST00000365621 103 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 Y_RNA.596-201ENST00000410462 109 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 SNORD4B-201ENST00000459083 72 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 RNU6-75P-201ENST00000515944 104 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 MIR4536-1-201ENST00000583537 88 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 AL078603.1-201ENST00000603824 313 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 MIR7107-201ENST00000611489 80 ntBASIC0.72□□□□□ -2.29
KDM1AO60341 RNU6-1131P-201ENST00000364955 107 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 RNU6-945P-201ENST00000383947 107 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 SNORD41.1-201ENST00000391000 69 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 Y_RNA.609-201ENST00000410669 89 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 RPS29P1-201ENST00000465274 159 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 MIR3920-201ENST00000581751 86 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 MIR151B-201ENST00000584249 96 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 MTRNR2L2-201ENST00000604882 87 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
KDM1AO60341 SNORD101-201ENST00000384027 73 ntBASIC0.7□□□□□ -2.3
KDM1AO60341 RNY4P30-201ENST00000410216 95 ntBASIC0.7□□□□□ -2.3
KDM1AO60341 SNORA40.8-201ENST00000411034 126 ntBASIC0.7□□□□□ -2.3
KDM1AO60341 RNA5SP220-201ENST00000516298 104 ntBASIC0.7□□□□□ -2.3
KDM1AO60341 SNORA25.18-201ENST00000607153 114 ntBASIC0.7□□□□□ -2.3
KDM1AO60341 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
KDM1AO60341 RNY1P7-201ENST00000384743 110 ntBASIC0.69□□□□□ -2.3
KDM1AO60341 AC026421.1-201ENST00000519101 163 ntBASIC0.69□□□□□ -2.3
KDM1AO60341 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
KDM1AO60341 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.69□□□□□ -2.3
KDM1AO60341 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
KDM1AO60341 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
KDM1AO60341 RNU6-1126P-201ENST00000384002 107 ntBASIC0.68□□□□□ -2.3
KDM1AO60341 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.68□□□□□ -2.3
KDM1AO60341 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.68□□□□□ -2.3
KDM1AO60341 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
KDM1AO60341 RNU6-664P-201ENST00000362381 107 ntBASIC0.67□□□□□ -2.3
KDM1AO60341 SNORD118-201ENST00000363593 134 ntBASIC0.67□□□□□ -2.3
KDM1AO60341 RNU6-49P-201ENST00000384256 107 ntBASIC0.67□□□□□ -2.3
KDM1AO60341 RNU7-74P-201ENST00000459104 62 ntBASIC0.67□□□□□ -2.3
KDM1AO60341 RN7SKP12-201ENST00000516275 143 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 275.5 ms