Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.53□□□□□ -2.32
ITM2AO43736 SNORD118-201ENST00000363593 134 ntBASIC0.52□□□□□ -2.33
ITM2AO43736 SNORD58A-201ENST00000383875 65 ntBASIC0.52□□□□□ -2.33
ITM2AO43736 Y_RNA.705-201ENST00000516862 110 ntBASIC0.52□□□□□ -2.33
ITM2AO43736 MIR3920-201ENST00000581751 86 ntBASIC0.52□□□□□ -2.33
ITM2AO43736 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.52□□□□□ -2.33
ITM2AO43736 TRDV1-202ENST00000621643 102 ntBASIC0.52□□□□□ -2.33
ITM2AO43736 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
ITM2AO43736 RNU6-716P-201ENST00000365621 103 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 Y_RNA.495-201ENST00000384435 112 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 RNU6-887P-201ENST00000410660 100 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 RNU7-85P-201ENST00000458851 63 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 Y_RNA.648-201ENST00000459455 110 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 U6.100-201ENST00000636230 99 ntBASIC0.51□□□□□ -2.33
ITM2AO43736 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-640P-201ENST00000363693 105 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNA5SP499-201ENST00000363982 119 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU1-93P-201ENST00000364704 169 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 Y_RNA.283-201ENST00000364798 112 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-32P-201ENST00000383948 107 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-13P-201ENST00000384248 107 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-905P-201ENST00000384434 107 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-12P-201ENST00000384604 107 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-41P-201ENST00000384741 107 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 SNORD41.1-201ENST00000391000 69 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-972P-201ENST00000391208 107 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 SNORA40.8-201ENST00000411034 126 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-75P-201ENST00000515944 104 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNA5SP227-201ENST00000516184 113 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RNU6-162P-201ENST00000516228 103 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 RN7SKP12-201ENST00000516275 143 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 MIR6715A-201ENST00000615929 79 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 AC067863.3-201ENST00000624172 122 ntBASIC0.5□□□□□ -2.33
ITM2AO43736 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.49□□□□□ -2.33
ITM2AO43736 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.49□□□□□ -2.33
ITM2AO43736 SNORA68.3-201ENST00000515906 83 ntBASIC0.49□□□□□ -2.33
ITM2AO43736 RNA5SP102-201ENST00000516865 106 ntBASIC0.49□□□□□ -2.33
ITM2AO43736 MIR548AG2-201ENST00000581228 64 ntBASIC0.49□□□□□ -2.33
ITM2AO43736 MTRNR2L2-201ENST00000604882 87 ntBASIC0.49□□□□□ -2.33
ITM2AO43736 U7.3-201ENST00000616123 62 ntBASIC0.49□□□□□ -2.33
ITM2AO43736 Y_RNA.290-201ENST00000364879 114 ntBASIC0.48□□□□□ -2.33
ITM2AO43736 RNA5SP89-201ENST00000410300 108 ntBASIC0.48□□□□□ -2.33
ITM2AO43736 RNU6-321P-201ENST00000410912 106 ntBASIC0.48□□□□□ -2.33
ITM2AO43736 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
ITM2AO43736 CYP3A137P-201ENST00000562436 69 ntBASIC0.48□□□□□ -2.33
ITM2AO43736 Y_RNA.190-201ENST00000363964 101 ntBASIC0.47□□□□□ -2.33
ITM2AO43736 AC069271.1-201ENST00000445577 156 ntBASIC0.47□□□□□ -2.33
ITM2AO43736 RNU6-168P-201ENST00000516189 101 ntBASIC0.47□□□□□ -2.33
ITM2AO43736 RNU7-13P-201ENST00000516413 62 ntBASIC0.47□□□□□ -2.33
ITM2AO43736 RNU1-29P-201ENST00000606574 126 ntBASIC0.47□□□□□ -2.33
ITM2AO43736 AL162376.1-201ENST00000624117 175 ntBASIC0.47□□□□□ -2.33
ITM2AO43736 SNORD44.1-201ENST00000363202 61 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 MIR488-201ENST00000365739 83 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 RNU6-1126P-201ENST00000384002 107 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 RNU6-466P-201ENST00000391224 103 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 SNORA40.13-201ENST00000516379 120 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 MIR4498-201ENST00000577599 66 ntBASIC0.46□□□□□ -2.34
ITM2AO43736 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
ITM2AO43736 RNU6-269P-201ENST00000391077 97 ntBASIC0.45□□□□□ -2.34
ITM2AO43736 SNORD4B-201ENST00000459083 72 ntBASIC0.45□□□□□ -2.34
ITM2AO43736 MIR4752-201ENST00000579672 72 ntBASIC0.45□□□□□ -2.34
ITM2AO43736 MIR4769-201ENST00000584126 77 ntBASIC0.45□□□□□ -2.34
ITM2AO43736 AC104984.5-201ENST00000586878 94 ntBASIC0.45□□□□□ -2.34
ITM2AO43736 Y_RNA.96-201ENST00000363092 109 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 MIR548L-201ENST00000408303 86 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 Y_RNA.596-201ENST00000410462 109 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 RNU6-287P-201ENST00000516230 98 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 Y_RNA.677-201ENST00000516401 85 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 MIR4714-201ENST00000580728 77 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 MIR4696-201ENST00000581431 70 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 MIR6755-201ENST00000619993 66 ntBASIC0.44□□□□□ -2.34
ITM2AO43736 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
ITM2AO43736 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 SNORD116-10-201ENST00000363791 102 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 Y_RNA.207-201ENST00000364142 106 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 SNORD71-201ENST00000411292 86 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 AC026421.1-201ENST00000519101 163 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 MIR4536-1-201ENST00000583537 88 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 MALAT1.1-201ENST00000618249 95 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 MIR2052-201ENST00000636055 55 ntBASIC0.43□□□□□ -2.34
ITM2AO43736 RNU6-664P-201ENST00000362381 107 ntBASIC0.42□□□□□ -2.34
ITM2AO43736 RNU6-132P-201ENST00000383863 107 ntBASIC0.42□□□□□ -2.34
ITM2AO43736 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
ITM2AO43736 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
ITM2AO43736 RNU2-59P-201ENST00000410482 191 ntBASIC0.42□□□□□ -2.34
ITM2AO43736 MIR2113-201ENST00000459007 91 ntBASIC0.42□□□□□ -2.34
ITM2AO43736 SNORD115-44-201ENST00000365391 82 ntBASIC0.41□□□□□ -2.34
ITM2AO43736 SNORD101-201ENST00000384027 73 ntBASIC0.41□□□□□ -2.34
ITM2AO43736 MIR617-201ENST00000385030 97 ntBASIC0.41□□□□□ -2.34
ITM2AO43736 MIR519E-201ENST00000385075 84 ntBASIC0.41□□□□□ -2.34
ITM2AO43736 RNU6-65P-201ENST00000516332 98 ntBASIC0.41□□□□□ -2.34
ITM2AO43736 MIRLET7F1-201ENST00000362202 87 ntBASIC0.4□□□□□ -2.35
ITM2AO43736 RNU6-519P-201ENST00000410590 108 ntBASIC0.4□□□□□ -2.35
ITM2AO43736 Y_RNA.609-201ENST00000410669 89 ntBASIC0.4□□□□□ -2.35
ITM2AO43736 AC093423.1-201ENST00000440817 142 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms