Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC048334.1-201ENST00000477975 159 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 AC023827.1-201ENST00000569247 97 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 MIR1273D-201ENST00000577266 86 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 MIR4299-201ENST00000577899 72 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.25□□□□□ -2.05
ACTN4O43707 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
ACTN4O43707 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ACTN4O43707 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
ACTN4O43707 MIR216B-201ENST00000390186 82 ntBASIC2.24□□□□□ -2.05
ACTN4O43707 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ACTN4O43707 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.24□□□□□ -2.05
ACTN4O43707 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.24□□□□□ -2.05
ACTN4O43707 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ACTN4O43707 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ACTN4O43707 RNU6-1039P-201ENST00000383931 107 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 MIR30A-201ENST00000385092 71 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 RN7SKP223-201ENST00000410582 62 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 RNU7-24P-201ENST00000458867 62 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 SNORA44.1-201ENST00000517031 108 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 AL512310.8-201ENST00000550183 120 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 MIR6509-201ENST00000614603 85 ntBASIC2.23□□□□□ -2.05
ACTN4O43707 RNA5SP425-201ENST00000410336 112 ntBASIC2.22□□□□□ -2.05
ACTN4O43707 NAMPTP3-201ENST00000569273 224 ntBASIC2.22□□□□□ -2.05
ACTN4O43707 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
ACTN4O43707 RNU6-495P-201ENST00000362995 107 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
ACTN4O43707 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 RNU6-977P-201ENST00000516411 103 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 MIR219B-201ENST00000637023 88 ntBASIC2.21□□□□□ -2.06
ACTN4O43707 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
ACTN4O43707 SNORD115-24-201ENST00000363528 82 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU6-1126P-201ENST00000384002 107 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 MIR203A-201ENST00000384836 110 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU1-119P-201ENST00000391122 165 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU6-994P-201ENST00000410507 111 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 SNORA31.2-201ENST00000516019 134 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 RNU6-542P-201ENST00000516405 103 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 MIR4804-201ENST00000581683 73 ntBASIC2.2□□□□□ -2.06
ACTN4O43707 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ACTN4O43707 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ACTN4O43707 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 MIR548AG2-201ENST00000581228 64 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 MIR3920-201ENST00000581751 86 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 AC073869.9-201ENST00000641610 120 ntBASIC2.19□□□□□ -2.06
ACTN4O43707 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ACTN4O43707 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
ACTN4O43707 AL356379.1-201ENST00000414105 126 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 AL591704.2-201ENST00000421658 181 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ACTN4O43707 SNORA31.14-201ENST00000516728 116 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 RN7SKP88-201ENST00000516847 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
ACTN4O43707 7SK.8-201ENST00000612110 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 7SK.11-201ENST00000615477 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 7SK.13-201ENST00000622040 250 ntBASIC2.18□□□□□ -2.06
ACTN4O43707 Y_RNA.32-201ENST00000362589 110 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 RNA5SP403-201ENST00000363598 108 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 Y_RNA.375-201ENST00000365625 101 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 RNU7-56P-201ENST00000458744 62 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 MIR3124-201ENST00000582636 67 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 AL157834.3-201ENST00000615543 103 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 AC092634.7-201ENST00000621022 103 ntBASIC2.17□□□□□ -2.06
ACTN4O43707 ZNF355P-201ENST00000427301 3216 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 Y_RNA.174-201ENST00000363781 105 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR617-201ENST00000385030 97 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR100-201ENST00000385259 80 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 SUMO2P12-201ENST00000405924 140 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR1261-201ENST00000408659 82 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 RNA5SP233-201ENST00000459153 113 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 RNA5SP364-201ENST00000516938 78 ntBASIC2.16□□□□□ -2.06
ACTN4O43707 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 MIR934-201ENST00000401241 83 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 RNU7-104P-201ENST00000459398 79 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 uc_338.16-201ENST00000621804 95 ntBASIC2.15□□□□□ -2.07
ACTN4O43707 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.15□□□□□ -2.07
ACTN4O43707 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.15□□□□□ -2.07
ACTN4O43707 RNU6-369P-201ENST00000362515 102 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 Y_RNA.363-201ENST00000365529 113 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTN4O43707 RNU7-21P-201ENST00000459430 62 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 RNU7-161P-201ENST00000517289 62 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 MIR548O2-201ENST00000616090 70 ntBASIC2.14□□□□□ -2.07
ACTN4O43707 RNU6-829P-201ENST00000363700 112 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 SNORA25.5-201ENST00000363782 126 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 RNU6-645P-201ENST00000364649 106 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 MIR504-201ENST00000385065 83 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 AC067940.1-201ENST00000458411 300 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 AL359821.1-201ENST00000605519 182 ntBASIC2.13□□□□□ -2.07
ACTN4O43707 MIR1-1-201ENST00000362147 71 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 RNU6-1079P-201ENST00000362861 110 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 RNU6-54P-201ENST00000365563 107 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 SNORA80D-201ENST00000384488 135 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ACTN4O43707 snoU13.26-201ENST00000459452 105 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 MIR4648-201ENST00000580107 72 ntBASIC2.12□□□□□ -2.07
ACTN4O43707 MIR466-201ENST00000580653 84 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 813.5 ms