Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.37□□□□□ -2.35
HDAC3O15379 SNORA63.4-201ENST00000362763 126 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 Y_RNA.57-201ENST00000362806 113 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 RNA5SP403-201ENST00000363598 108 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 RNU6-1244P-201ENST00000363614 108 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 SNORA8.2-201ENST00000384372 139 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 MIR590-201ENST00000385008 97 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 MIR519A1-201ENST00000385257 85 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 AL161932.1-201ENST00000437408 146 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 AC097635.1-201ENST00000450678 155 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 Y_RNA.809-201ENST00000516058 95 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 RNU6-904P-201ENST00000516206 101 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 SCARNA16.5-201ENST00000517114 183 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 MIR4777-201ENST00000583710 86 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 MIR4639-201ENST00000584938 69 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 MIR7107-201ENST00000611489 80 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
HDAC3O15379 SNORD36A-201ENST00000362874 73 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 RNU6-524P-201ENST00000384270 107 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 MIR181B2-201ENST00000385004 89 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 RNU7-104P-201ENST00000459398 79 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 RNU6-109P-201ENST00000516364 107 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 RNU6-184P-201ENST00000516514 107 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 RNU7-10P-201ENST00000607194 63 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 AC025521.1-201ENST00000621624 286 ntBASIC0.35□□□□□ -2.35
HDAC3O15379 MIR450A1-201ENST00000362262 91 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 RNU6-1260P-201ENST00000362944 107 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 Y_RNA.95-201ENST00000363079 95 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 RNU6-1229P-201ENST00000364295 107 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 RNU6-716P-201ENST00000365621 103 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 RNU6-44P-201ENST00000384045 107 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 RN7SKP12-201ENST00000516275 143 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 MIR548AI-201ENST00000579940 88 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 AC096720.1-201ENST00000604441 183 ntBASIC0.34□□□□□ -2.36
HDAC3O15379 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
HDAC3O15379 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 RNU4-36P-201ENST00000364294 144 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 SNORD45B-201ENST00000364617 72 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 SNORA51.5-201ENST00000384126 131 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 MIR1302-5-201ENST00000408164 150 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 Y_RNA.601-201ENST00000410500 113 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 SNORA40.8-201ENST00000411034 126 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 snoU13.11-201ENST00000459219 104 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 RNA5SP227-201ENST00000516184 113 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 RNU6-1265P-201ENST00000516342 103 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 RNU6-135P-201ENST00000516769 101 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 AC103810.7-201ENST00000607821 91 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.33□□□□□ -2.36
HDAC3O15379 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 Y_RNA.78-201ENST00000362970 110 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 RNU6-957P-201ENST00000363652 99 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 RNU6-726P-201ENST00000364680 107 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 RNU6-756P-201ENST00000383997 107 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 RNU6-1254P-201ENST00000391266 104 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 AL035461.1-201ENST00000421490 332 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 AC069271.1-201ENST00000445577 156 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 SCARNA23-201ENST00000516060 130 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 RNU6-919P-201ENST00000516731 104 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 MIR4752-201ENST00000579672 72 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 AC243829.6-201ENST00000612652 106 ntBASIC0.32□□□□□ -2.36
HDAC3O15379 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.32□□□□□ -2.36
HDAC3O15379 MIR103A1-201ENST00000362165 78 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 RNU6-755P-201ENST00000364400 103 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 MIR216A-201ENST00000385063 110 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 RNU6-243P-201ENST00000391140 107 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 RNU6-644P-201ENST00000391155 98 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.31□□□□□ -2.36
HDAC3O15379 AL513043.2-201ENST00000573941 143 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 MIR3920-201ENST00000581751 86 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 RNU1-29P-201ENST00000606574 126 ntBASIC0.31□□□□□ -2.36
HDAC3O15379 RNU6-766P-201ENST00000362478 107 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 Y_RNA.466-201ENST00000384294 113 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 RNU6-813P-201ENST00000384691 107 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 MIR548AG2-201ENST00000581228 64 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 TRDV1-202ENST00000621643 102 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.3□□□□□ -2.36
HDAC3O15379 U6.100-201ENST00000636230 99 ntBASIC0.3□□□□□ -2.36
HDAC3O15379 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 Y_RNA.10-201ENST00000362371 110 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 RNU6-1125P-201ENST00000363601 107 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 RNU6-147P-201ENST00000383983 107 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 RNU6-480P-201ENST00000384332 107 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 SNORD41.1-201ENST00000391000 69 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 AL031737.1-201ENST00000450125 223 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 RNU7-85P-201ENST00000458851 63 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 RNU7-61P-201ENST00000515897 61 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 MIR4439-201ENST00000583746 80 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 MIR6755-201ENST00000619993 66 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 AC067863.3-201ENST00000624172 122 ntBASIC0.29□□□□□ -2.36
HDAC3O15379 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
HDAC3O15379 Y_RNA.283-201ENST00000364798 112 ntBASIC0.28□□□□□ -2.36
HDAC3O15379 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
HDAC3O15379 RNU6-1126P-201ENST00000384002 107 ntBASIC0.28□□□□□ -2.36
HDAC3O15379 RNU6-269P-201ENST00000391077 97 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms