Protein–RNA interactions for Protein: O00562

PITPNM1, Membrane-associated phosphatidylinositol transfer protein 1, humanhuman

Predictions only

Length 1,244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNM1O00562 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
PITPNM1O00562 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
PITPNM1O00562 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PITPNM1O00562 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PITPNM1O00562 RNU1-141P-201ENST00000364623 158 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 RNA5SP148-201ENST00000516527 94 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 RNU5B-6P-201ENST00000516765 68 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 RNU6-56P-201ENST00000516986 93 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
PITPNM1O00562 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PITPNM1O00562 MIR26A1-201ENST00000362205 77 ntBASIC2.98□□□□□ -1.93
PITPNM1O00562 RNU7-56P-201ENST00000458744 62 ntBASIC2.98□□□□□ -1.93
PITPNM1O00562 AC008413.1-201ENST00000511864 177 ntBASIC2.98□□□□□ -1.93
PITPNM1O00562 RNU6-1206P-201ENST00000516339 103 ntBASIC2.98□□□□□ -1.93
PITPNM1O00562 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PITPNM1O00562 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.97□□□□□ -1.93
PITPNM1O00562 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PITPNM1O00562 RN7SL75P-201ENST00000461926 281 ntBASIC2.97□□□□□ -1.93
PITPNM1O00562 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
PITPNM1O00562 RNA5SP282-201ENST00000516355 108 ntBASIC2.97□□□□□ -1.93
PITPNM1O00562 SNORD53-201ENST00000579969 78 ntBASIC2.97□□□□□ -1.93
PITPNM1O00562 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.97□□□□□ -1.93
PITPNM1O00562 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.97□□□□□ -1.93
PITPNM1O00562 RNU6-439P-201ENST00000384188 106 ntBASIC2.96□□□□□ -1.94
PITPNM1O00562 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.96□□□□□ -1.94
PITPNM1O00562 UQCRHP3-201ENST00000451503 251 ntBASIC2.96□□□□□ -1.94
PITPNM1O00562 RNU7-160P-201ENST00000516660 62 ntBASIC2.96□□□□□ -1.94
PITPNM1O00562 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
PITPNM1O00562 AL157834.3-201ENST00000615543 103 ntBASIC2.96□□□□□ -1.94
PITPNM1O00562 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PITPNM1O00562 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PITPNM1O00562 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PITPNM1O00562 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
PITPNM1O00562 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.95□□□□□ -1.94
PITPNM1O00562 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PITPNM1O00562 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PITPNM1O00562 RNU6-742P-201ENST00000365289 107 ntBASIC2.94□□□□□ -1.94
PITPNM1O00562 DEFA7P-201ENST00000382676 285 ntBASIC2.94□□□□□ -1.94
PITPNM1O00562 RNU6-721P-201ENST00000410155 105 ntBASIC2.94□□□□□ -1.94
PITPNM1O00562 HMGN2P38-201ENST00000423806 265 ntBASIC2.94□□□□□ -1.94
PITPNM1O00562 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
PITPNM1O00562 RNU6-237P-201ENST00000515985 71 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 SCARNA17.3-201ENST00000516381 125 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 MIR4529-201ENST00000578110 78 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 SNORA77B-201ENST00000578179 125 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 AL136317.1-201ENST00000612653 226 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 AL773524.1-201ENST00000614065 229 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 AC080100.1-201ENST00000624239 5356 ntBASIC2.93□□□□□ -1.94
PITPNM1O00562 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PITPNM1O00562 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PITPNM1O00562 MIR429-201ENST00000362106 83 ntBASIC2.92□□□□□ -1.94
PITPNM1O00562 SNORA3.2-201ENST00000408221 125 ntBASIC2.92□□□□□ -1.94
PITPNM1O00562 MIR548L-201ENST00000408303 86 ntBASIC2.92□□□□□ -1.94
PITPNM1O00562 RNU6-135P-201ENST00000516769 101 ntBASIC2.92□□□□□ -1.94
PITPNM1O00562 U8.9-201ENST00000365667 134 ntBASIC2.91□□□□□ -1.94
PITPNM1O00562 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
PITPNM1O00562 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
PITPNM1O00562 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.9□□□□□ -1.94
PITPNM1O00562 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.9□□□□□ -1.94
PITPNM1O00562 SNORA6-201ENST00000384033 151 ntBASIC2.9□□□□□ -1.95
PITPNM1O00562 MIR3605-201ENST00000583214 100 ntBASIC2.9□□□□□ -1.95
PITPNM1O00562 U6.96-201ENST00000636425 70 ntBASIC2.9□□□□□ -1.95
PITPNM1O00562 Y_RNA.69-201ENST00000362885 109 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 Y_RNA.109-201ENST00000363215 102 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 SNORA7.1-201ENST00000363750 139 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 RNA5SP492-201ENST00000411330 114 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 snoU13.26-201ENST00000459452 105 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 MIR4658-201ENST00000584344 65 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 MIR4639-201ENST00000584938 69 ntBASIC2.89□□□□□ -1.95
PITPNM1O00562 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PITPNM1O00562 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PITPNM1O00562 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PITPNM1O00562 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PITPNM1O00562 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
PITPNM1O00562 MIR519A2-201ENST00000384990 87 ntBASIC2.88□□□□□ -1.95
PITPNM1O00562 MIR504-201ENST00000385065 83 ntBASIC2.88□□□□□ -1.95
PITPNM1O00562 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.88□□□□□ -1.95
PITPNM1O00562 SNORA31.25-201ENST00000517242 134 ntBASIC2.88□□□□□ -1.95
PITPNM1O00562 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PITPNM1O00562 MIR27B-201ENST00000385129 97 ntBASIC2.87□□□□□ -1.95
PITPNM1O00562 SNORA75.2-201ENST00000391138 150 ntBASIC2.87□□□□□ -1.95
PITPNM1O00562 SNORA75.3-201ENST00000391231 150 ntBASIC2.87□□□□□ -1.95
PITPNM1O00562 AC015712.3-201ENST00000559380 164 ntBASIC2.87□□□□□ -1.95
PITPNM1O00562 AC023827.1-201ENST00000569247 97 ntBASIC2.87□□□□□ -1.95
PITPNM1O00562 MIR7843-201ENST00000622274 79 ntBASIC2.87□□□□□ -1.95
PITPNM1O00562 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
PITPNM1O00562 MIR582-201ENST00000365731 98 ntBASIC2.86□□□□□ -1.95
PITPNM1O00562 MIR548E-201ENST00000408287 88 ntBASIC2.86□□□□□ -1.95
PITPNM1O00562 AL451105.1-201ENST00000450005 189 ntBASIC2.86□□□□□ -1.95
PITPNM1O00562 snoU13.15-201ENST00000459407 104 ntBASIC2.86□□□□□ -1.95
PITPNM1O00562 RNA5SP320-201ENST00000516263 124 ntBASIC2.86□□□□□ -1.95
PITPNM1O00562 AC244669.1-204ENST00000621564 178 ntBASIC2.86□□□□□ -1.95
PITPNM1O00562 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
PITPNM1O00562 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
PITPNM1O00562 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.84□□□□□ -1.95
PITPNM1O00562 SNORA8.2-201ENST00000384372 139 ntBASIC2.84□□□□□ -1.95
PITPNM1O00562 MIR329-2-201ENST00000385029 84 ntBASIC2.84□□□□□ -1.95
PITPNM1O00562 MIR579-201ENST00000385221 98 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 310 ms