Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 RNU7-195P-201ENST00000458793 62 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 RNU6-977P-201ENST00000516411 103 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 RNU6-448P-201ENST00000517052 107 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 MIR4804-201ENST00000581683 73 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 RNU1-17P-201ENST00000363022 152 ntBASIC1.67□□□□□ -2.14
FOXD3Q9UJU5 Y_RNA.313-201ENST00000365095 103 ntBASIC1.67□□□□□ -2.14
FOXD3Q9UJU5 Y_RNA.508-201ENST00000384502 114 ntBASIC1.67□□□□□ -2.14
FOXD3Q9UJU5 MIR222-201ENST00000384992 110 ntBASIC1.67□□□□□ -2.14
FOXD3Q9UJU5 RNU6-75P-201ENST00000515944 104 ntBASIC1.67□□□□□ -2.14
FOXD3Q9UJU5 AL359821.1-201ENST00000605519 182 ntBASIC1.67□□□□□ -2.14
FOXD3Q9UJU5 Y_RNA.164-201ENST00000363709 102 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 Y_RNA.316-201ENST00000365118 111 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 MIR100-201ENST00000385259 80 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 MIR548U-201ENST00000390728 81 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 RNU1-119P-201ENST00000391122 165 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 RNA5SP225-201ENST00000410874 135 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 RNU7-102P-201ENST00000458948 62 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 MIR4781-201ENST00000585250 76 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.66□□□□□ -2.14
FOXD3Q9UJU5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
FOXD3Q9UJU5 RNU6-652P-201ENST00000365488 107 ntBASIC1.65□□□□□ -2.15
FOXD3Q9UJU5 SNORA25-201ENST00000384384 134 ntBASIC1.65□□□□□ -2.15
FOXD3Q9UJU5 MIR1827-201ENST00000408549 66 ntBASIC1.65□□□□□ -2.15
FOXD3Q9UJU5 RNU7-56P-201ENST00000458744 62 ntBASIC1.65□□□□□ -2.15
FOXD3Q9UJU5 SNORA25.13-201ENST00000516395 103 ntBASIC1.65□□□□□ -2.15
FOXD3Q9UJU5 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
FOXD3Q9UJU5 RNU6-535P-201ENST00000384722 107 ntBASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 SNORA67.5-201ENST00000391036 107 ntBASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 AC002429.1-201ENST00000437672 148 ntBASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 MIR4498-201ENST00000577599 66 ntBASIC1.64□□□□□ -2.15
FOXD3Q9UJU5 RNU6-957P-201ENST00000363652 99 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 RNU6-291P-201ENST00000384720 107 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 RNU6-1053P-201ENST00000515930 101 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 RNU7-153P-201ENST00000516455 62 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 MIR4255-201ENST00000579351 72 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 MIR4796-201ENST00000580742 81 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 AC104996.3-201ENST00000590718 94 ntBASIC1.63□□□□□ -2.15
FOXD3Q9UJU5 Y_RNA.226-201ENST00000364337 114 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 MIR9-3-201ENST00000385084 90 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 RNU6-857P-201ENST00000515893 110 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 MIR3064-201ENST00000581130 66 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 TRDV1-202ENST00000621643 102 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
FOXD3Q9UJU5 SNORA16.1-201ENST00000364597 132 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 RNA5SP190-201ENST00000365222 118 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 RNU6-24P-201ENST00000384440 107 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 MIR599-201ENST00000385069 95 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 AC008608.1-201ENST00000603910 127 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 MIR502-201ENST00000606349 86 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 AL136317.1-201ENST00000612653 226 ntBASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
FOXD3Q9UJU5 RNU6-624P-201ENST00000363411 107 ntBASIC1.6□□□□□ -2.15
FOXD3Q9UJU5 MIR520F-201ENST00000384824 87 ntBASIC1.6□□□□□ -2.15
FOXD3Q9UJU5 MIR518E-201ENST00000385252 88 ntBASIC1.6□□□□□ -2.15
FOXD3Q9UJU5 AC244505.6-201ENST00000452829 130 ntBASIC1.6□□□□□ -2.15
FOXD3Q9UJU5 MIR3122-201ENST00000577243 73 ntBASIC1.6□□□□□ -2.15
FOXD3Q9UJU5 RNA5SP327-201ENST00000362494 101 ntBASIC1.59□□□□□ -2.15
FOXD3Q9UJU5 RNU6-315P-201ENST00000362666 107 ntBASIC1.59□□□□□ -2.15
FOXD3Q9UJU5 Y_RNA.174-201ENST00000363781 105 ntBASIC1.59□□□□□ -2.15
FOXD3Q9UJU5 Y_RNA.491-201ENST00000384417 107 ntBASIC1.59□□□□□ -2.15
FOXD3Q9UJU5 FABP5P4-201ENST00000437203 171 ntBASIC1.59□□□□□ -2.15
FOXD3Q9UJU5 RNU6-132P-201ENST00000383863 107 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 MIR19B1-201ENST00000384829 87 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 RNA5SP292-201ENST00000390974 118 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 RNU6-129P-201ENST00000391022 107 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 RNU6-1110P-201ENST00000516462 101 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 SNORA18.5-201ENST00000516616 101 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 MIR4712-201ENST00000583750 82 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 RMST_2.1-201ENST00000617263 136 ntBASIC1.58□□□□□ -2.16
FOXD3Q9UJU5 MIR378A-201ENST00000362177 66 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 MIR1287-201ENST00000408492 90 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 AC108667.1-201ENST00000428618 249 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 FGF7P7-201ENST00000514120 227 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 RNU6-557P-201ENST00000516842 110 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 AC019288.1-201ENST00000557918 224 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 snoU13.31-201ENST00000607291 104 ntBASIC1.57□□□□□ -2.16
FOXD3Q9UJU5 SNORD26-201ENST00000384147 75 ntBASIC1.56□□□□□ -2.16
FOXD3Q9UJU5 Y_RNA.660-201ENST00000516002 120 ntBASIC1.56□□□□□ -2.16
FOXD3Q9UJU5 RNU6-1265P-201ENST00000516342 103 ntBASIC1.56□□□□□ -2.16
FOXD3Q9UJU5 MTRNR2L2-201ENST00000604882 87 ntBASIC1.56□□□□□ -2.16
FOXD3Q9UJU5 MIR7111-201ENST00000619751 72 ntBASIC1.56□□□□□ -2.16
FOXD3Q9UJU5 MIRLET7F1-201ENST00000362202 87 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 Y_RNA.94-201ENST00000363068 106 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 RNA5SP245-201ENST00000364239 121 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 Y_RNA.239-201ENST00000364444 113 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 Y_RNA.244-201ENST00000364484 109 ntBASIC1.55□□□□□ -2.16
FOXD3Q9UJU5 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 195.6 ms