Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
UBP1Q9NZI7 AL157834.3-201ENST00000615543 103 ntBASIC1.36□□□□□ -2.19
UBP1Q9NZI7 Y_RNA.174-201ENST00000363781 105 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 Y_RNA.190-201ENST00000363964 101 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 RNU6-291P-201ENST00000384720 107 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 MIR516A2-201ENST00000384888 90 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 MIR516A1-201ENST00000385033 90 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 MIR520H-201ENST00000385126 88 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 TRAJ51-201ENST00000504127 63 ntBASIC1.35□□□□□ -2.19
UBP1Q9NZI7 SNORD36A-201ENST00000362874 73 ntBASIC1.34□□□□□ -2.19
UBP1Q9NZI7 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
UBP1Q9NZI7 RNU7-95P-201ENST00000459222 64 ntBASIC1.34□□□□□ -2.19
UBP1Q9NZI7 TRMT112P2-201ENST00000512910 132 ntBASIC1.34□□□□□ -2.19
UBP1Q9NZI7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.34□□□□□ -2.19
UBP1Q9NZI7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.34□□□□□ -2.19
UBP1Q9NZI7 RNU6-321P-201ENST00000410912 106 ntBASIC1.33□□□□□ -2.2
UBP1Q9NZI7 AC097635.1-201ENST00000450678 155 ntBASIC1.33□□□□□ -2.2
UBP1Q9NZI7 Y_RNA.648-201ENST00000459455 110 ntBASIC1.33□□□□□ -2.2
UBP1Q9NZI7 RNU7-106P-201ENST00000459514 67 ntBASIC1.33□□□□□ -2.2
UBP1Q9NZI7 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
UBP1Q9NZI7 MIR7974-201ENST00000615835 79 ntBASIC1.33□□□□□ -2.2
UBP1Q9NZI7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBP1Q9NZI7 RNU6-1260P-201ENST00000362944 107 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 RNU6-1134P-201ENST00000365156 101 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 SNORD116-22-201ENST00000384430 92 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 RNA5SP255-201ENST00000516370 107 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
UBP1Q9NZI7 MIR337-201ENST00000362281 93 ntBASIC1.31□□□□□ -2.2
UBP1Q9NZI7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.31□□□□□ -2.2
UBP1Q9NZI7 RNU6-939P-201ENST00000384634 107 ntBASIC1.3□□□□□ -2.2
UBP1Q9NZI7 RNU7-195P-201ENST00000458793 62 ntBASIC1.3□□□□□ -2.2
UBP1Q9NZI7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.3□□□□□ -2.2
UBP1Q9NZI7 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
UBP1Q9NZI7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.29□□□□□ -2.2
UBP1Q9NZI7 AL161932.1-201ENST00000437408 146 ntBASIC1.29□□□□□ -2.2
UBP1Q9NZI7 AC244505.6-201ENST00000452829 130 ntBASIC1.29□□□□□ -2.2
UBP1Q9NZI7 AC002350.1-201ENST00000490759 375 ntBASIC1.29□□□□□ -2.2
UBP1Q9NZI7 uc_338.16-201ENST00000621804 95 ntBASIC1.29□□□□□ -2.2
UBP1Q9NZI7 RNA5SP117-201ENST00000365294 118 ntBASIC1.28□□□□□ -2.2
UBP1Q9NZI7 SNORA40.6-201ENST00000391153 128 ntBASIC1.28□□□□□ -2.2
UBP1Q9NZI7 RNU6-466P-201ENST00000391224 103 ntBASIC1.28□□□□□ -2.2
UBP1Q9NZI7 RNU6-519P-201ENST00000410590 108 ntBASIC1.28□□□□□ -2.2
UBP1Q9NZI7 Y_RNA.609-201ENST00000410669 89 ntBASIC1.28□□□□□ -2.2
UBP1Q9NZI7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.27□□□□□ -2.21
UBP1Q9NZI7 MIR599-201ENST00000385069 95 ntBASIC1.27□□□□□ -2.21
UBP1Q9NZI7 MIR1287-201ENST00000408492 90 ntBASIC1.27□□□□□ -2.21
UBP1Q9NZI7 RNU6-135P-201ENST00000516769 101 ntBASIC1.27□□□□□ -2.21
UBP1Q9NZI7 Y_RNA.32-201ENST00000362589 110 ntBASIC1.26□□□□□ -2.21
UBP1Q9NZI7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UBP1Q9NZI7 MIR573-201ENST00000384964 99 ntBASIC1.26□□□□□ -2.21
UBP1Q9NZI7 SNORA31.14-201ENST00000516728 116 ntBASIC1.26□□□□□ -2.21
UBP1Q9NZI7 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
UBP1Q9NZI7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.26□□□□□ -2.21
UBP1Q9NZI7 MIR4679-1-201ENST00000637619 75 ntBASIC1.26□□□□□ -2.21
UBP1Q9NZI7 Y_RNA.17-201ENST00000362433 111 ntBASIC1.25□□□□□ -2.21
UBP1Q9NZI7 RNA5SP245-201ENST00000364239 121 ntBASIC1.25□□□□□ -2.21
UBP1Q9NZI7 MIR450A2-201ENST00000385022 100 ntBASIC1.25□□□□□ -2.21
UBP1Q9NZI7 MIR1302-4-201ENST00000408701 150 ntBASIC1.25□□□□□ -2.21
UBP1Q9NZI7 MIR4668-201ENST00000582284 70 ntBASIC1.25□□□□□ -2.21
UBP1Q9NZI7 MIR8070-201ENST00000616510 88 ntBASIC1.25□□□□□ -2.21
UBP1Q9NZI7 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.25□□□□□ -2.21
UBP1Q9NZI7 Y_RNA.283-201ENST00000364798 112 ntBASIC1.24□□□□□ -2.21
UBP1Q9NZI7 MIR4661-201ENST00000582720 75 ntBASIC1.24□□□□□ -2.21
UBP1Q9NZI7 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.24□□□□□ -2.21
UBP1Q9NZI7 AL353770.2-201ENST00000620024 78 ntBASIC1.24□□□□□ -2.21
UBP1Q9NZI7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
UBP1Q9NZI7 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 RNU6-1335P-201ENST00000365426 107 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 RNU6-675P-201ENST00000384236 104 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 MIR150-201ENST00000385048 84 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 SNORD4B-201ENST00000459083 72 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 snoU13.11-201ENST00000459219 104 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.23□□□□□ -2.21
UBP1Q9NZI7 RNU6-469P-201ENST00000516253 101 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 RNU6-65P-201ENST00000516332 98 ntBASIC1.23□□□□□ -2.21
UBP1Q9NZI7 SNORA25.9-201ENST00000365087 128 ntBASIC1.22□□□□□ -2.21
UBP1Q9NZI7 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
UBP1Q9NZI7 Y_RNA.593-201ENST00000410292 98 ntBASIC1.22□□□□□ -2.21
UBP1Q9NZI7 Y_RNA.620-201ENST00000411009 88 ntBASIC1.22□□□□□ -2.21
UBP1Q9NZI7 MIR4536-1-201ENST00000583537 88 ntBASIC1.22□□□□□ -2.21
UBP1Q9NZI7 SNORD73B-201ENST00000364394 72 ntBASIC1.21□□□□□ -2.22
UBP1Q9NZI7 RNU4-45P-201ENST00000365469 141 ntBASIC1.21□□□□□ -2.22
UBP1Q9NZI7 RNU6-524P-201ENST00000384270 107 ntBASIC1.21□□□□□ -2.22
UBP1Q9NZI7 RNU6-820P-201ENST00000384273 107 ntBASIC1.21□□□□□ -2.22
UBP1Q9NZI7 RNU6-402P-201ENST00000410678 103 ntBASIC1.21□□□□□ -2.22
UBP1Q9NZI7 RNU7-85P-201ENST00000458851 63 ntBASIC1.21□□□□□ -2.22
UBP1Q9NZI7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.2□□□□□ -2.22
UBP1Q9NZI7 RNU6-219P-201ENST00000364728 107 ntBASIC1.2□□□□□ -2.22
UBP1Q9NZI7 SNORD99-201ENST00000408612 74 ntBASIC1.2□□□□□ -2.22
UBP1Q9NZI7 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.2□□□□□ -2.22
UBP1Q9NZI7 MIR3612-201ENST00000579753 87 ntBASIC1.2□□□□□ -2.22
UBP1Q9NZI7 IGLL4P-201ENST00000614590 133 ntBASIC1.2□□□□□ -2.22
UBP1Q9NZI7 TRDV1-202ENST00000621643 102 ntBASIC1.2□□□□□ -2.22
UBP1Q9NZI7 RNU6-633P-201ENST00000362612 103 ntBASIC1.19□□□□□ -2.22
UBP1Q9NZI7 RNU6-957P-201ENST00000363652 99 ntBASIC1.19□□□□□ -2.22
UBP1Q9NZI7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.19□□□□□ -2.22
UBP1Q9NZI7 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.19□□□□□ -2.22
UBP1Q9NZI7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms