Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR5007-201ENST00000583098 95 ntBASIC2.27□□□□□ -2.05
PRDM9Q9NQV7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.27□□□□□ -2.05
PRDM9Q9NQV7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 Y_RNA.258-201ENST00000364613 105 ntBASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 RNU7-24P-201ENST00000458867 62 ntBASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 AC036111.3-201ENST00000526389 112 ntBASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 AC008608.1-201ENST00000603910 127 ntBASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 AC103810.8-201ENST00000607347 118 ntBASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
PRDM9Q9NQV7 SNORA40.6-201ENST00000391153 128 ntBASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 SNORD75.2-201ENST00000408784 58 ntBASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 snoU13.9-201ENST00000458927 103 ntBASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 AC026436.1-201ENST00000510537 270 ntBASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 RNU6-287P-201ENST00000516230 98 ntBASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 RNU6-165P-201ENST00000517170 99 ntBASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
PRDM9Q9NQV7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRDM9Q9NQV7 SNORD111-201ENST00000408139 94 ntBASIC2.24□□□□□ -2.05
PRDM9Q9NQV7 AC079140.2-201ENST00000506193 142 ntBASIC2.24□□□□□ -2.05
PRDM9Q9NQV7 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
PRDM9Q9NQV7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
PRDM9Q9NQV7 RPS26P5-201ENST00000418544 335 ntBASIC2.23□□□□□ -2.05
PRDM9Q9NQV7 AC079150.2-201ENST00000443733 78 ntBASIC2.23□□□□□ -2.05
PRDM9Q9NQV7 AC079804.2-201ENST00000490376 200 ntBASIC2.23□□□□□ -2.05
PRDM9Q9NQV7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.23□□□□□ -2.05
PRDM9Q9NQV7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 MIR21-201ENST00000362134 72 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 RNA5SP245-201ENST00000364239 121 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 SNORD1A-201ENST00000364968 72 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 MIR4676-201ENST00000583078 72 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 AC104984.5-201ENST00000586878 94 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 AL078603.1-201ENST00000603824 313 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 AC046143.2-201ENST00000609789 160 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 AC106800.4-201ENST00000614905 153 ntBASIC2.22□□□□□ -2.05
PRDM9Q9NQV7 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 RNA5SP289-201ENST00000362332 137 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 RNU6-1187P-201ENST00000364771 110 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 RNU6-364P-201ENST00000384387 107 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 MIR938-201ENST00000401216 83 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 RNA5SP508-201ENST00000411327 119 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 MTND4LP1-201ENST00000446263 157 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 SNORA44.1-201ENST00000517031 108 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 MIR4287-201ENST00000579398 78 ntBASIC2.21□□□□□ -2.06
PRDM9Q9NQV7 Y_RNA.330-201ENST00000365230 109 ntBASIC2.2□□□□□ -2.06
PRDM9Q9NQV7 AL691482.2-201ENST00000457453 84 ntBASIC2.2□□□□□ -2.06
PRDM9Q9NQV7 RNU7-13P-201ENST00000516413 62 ntBASIC2.2□□□□□ -2.06
PRDM9Q9NQV7 AC019176.1-201ENST00000518519 225 ntBASIC2.2□□□□□ -2.06
PRDM9Q9NQV7 MIR3937-201ENST00000580135 106 ntBASIC2.2□□□□□ -2.06
PRDM9Q9NQV7 SNORA16B-201ENST00000364674 135 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 RNU6-614P-201ENST00000384369 107 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 MIR30A-201ENST00000385092 71 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 RNU4-53P-201ENST00000410828 140 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 AC008413.1-201ENST00000511864 177 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 RNU7-40P-201ENST00000516397 64 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 U6.59-201ENST00000615686 107 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 MIR6766-201ENST00000622641 72 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 AC027335.2-201ENST00000624030 375 ntBASIC2.19□□□□□ -2.06
PRDM9Q9NQV7 SNORA75.2-201ENST00000391138 150 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 SNORA75.3-201ENST00000391231 150 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 RNU6-977P-201ENST00000516411 103 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 AL512310.8-201ENST00000550183 120 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 MIR4299-201ENST00000577899 72 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 MIR3920-201ENST00000581751 86 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 MIR6715A-201ENST00000615929 79 ntBASIC2.18□□□□□ -2.06
PRDM9Q9NQV7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 RNU6-1126P-201ENST00000384002 107 ntBASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 SNORA48.3-201ENST00000391081 134 ntBASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 HMGN2P23-201ENST00000456759 269 ntBASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 SNORD53-201ENST00000579969 78 ntBASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 AL359821.1-201ENST00000605519 182 ntBASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 AC073869.9-201ENST00000641610 120 ntBASIC2.17□□□□□ -2.06
PRDM9Q9NQV7 RNU6-495P-201ENST00000362995 107 ntBASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 MIR633-201ENST00000384821 98 ntBASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 RNU7-102P-201ENST00000458948 62 ntBASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 RNA5SP200-201ENST00000516360 103 ntBASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 RNU6-542P-201ENST00000516405 103 ntBASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
PRDM9Q9NQV7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.15□□□□□ -2.06
PRDM9Q9NQV7 RNA5SP403-201ENST00000363598 108 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 Y_RNA.174-201ENST00000363781 105 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 RNU6-668P-201ENST00000364180 107 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 Y_RNA.375-201ENST00000365625 101 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 RNU6-1039P-201ENST00000383931 107 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 AL109933.3-201ENST00000619095 188 ntBASIC2.15□□□□□ -2.07
PRDM9Q9NQV7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 MIR1261-201ENST00000408659 82 ntBASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 AL356320.1-201ENST00000429616 163 ntBASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 AC048334.1-201ENST00000477975 159 ntBASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 RNU1-41P-201ENST00000516161 162 ntBASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 RNU6-982P-201ENST00000516216 102 ntBASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 RNU1-48P-201ENST00000516400 162 ntBASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.14□□□□□ -2.07
PRDM9Q9NQV7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PRDM9Q9NQV7 SNORA70B-201ENST00000384210 135 ntBASIC2.13□□□□□ -2.07
PRDM9Q9NQV7 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 199.2 ms