Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 RNY3P14-201ENST00000384309 102 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 SNORA75.5-201ENST00000391291 81 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 MIR3171-201ENST00000584270 74 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 U6.106-201ENST00000636360 105 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 U6.104-201ENST00000637979 90 ntBASIC-0.84□□□□□ -2.54
VCX3AQ9NNX9 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.85□□□□□ -2.55
VCX3AQ9NNX9 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
VCX3AQ9NNX9 SNORA40.17-201ENST00000517256 115 ntBASIC-0.85□□□□□ -2.55
VCX3AQ9NNX9 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.85□□□□□ -2.55
VCX3AQ9NNX9 SNORD36A-201ENST00000362874 73 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 RNA5SP257-201ENST00000363023 116 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 RNU6-508P-201ENST00000363231 103 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 RNU6-243P-201ENST00000391140 107 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 MIR1302-6-201ENST00000408466 90 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 RNU6-521P-201ENST00000516663 105 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 MIR8062-201ENST00000621515 85 ntBASIC-0.86□□□□□ -2.55
VCX3AQ9NNX9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.87□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.87□□□□□ -2.55
VCX3AQ9NNX9 RNU4-36P-201ENST00000364294 144 ntBASIC-0.87□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.87□□□□□ -2.55
VCX3AQ9NNX9 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.87□□□□□ -2.55
VCX3AQ9NNX9 AC020661.2-201ENST00000560114 134 ntBASIC-0.87□□□□□ -2.55
VCX3AQ9NNX9 SNORD115-19-201ENST00000363098 82 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 SNORD115-18-201ENST00000363293 82 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 RNU6-957P-201ENST00000363652 99 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 SNORD115-17-201ENST00000364612 82 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 AC107027.2-201ENST00000512197 115 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 AL137067.1-201ENST00000615933 120 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 MIR548O2-201ENST00000616090 70 ntBASIC-0.88□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 MIR216B-201ENST00000390186 82 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 RNU6-635P-201ENST00000516651 102 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 RNA5SP480-201ENST00000516840 109 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 AC108081.1-201ENST00000604358 221 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 MTND5P18-201ENST00000445624 1801 ntBASIC-0.89□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 RNU6-309P-201ENST00000364573 106 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 SNORD101-201ENST00000384027 73 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 RNU6-588P-201ENST00000410281 105 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 SNORD2-201ENST00000459163 69 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 RNU7-6P-201ENST00000516845 62 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.9□□□□□ -2.55
VCX3AQ9NNX9 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.337-201ENST00000365312 102 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 SNORA33.2-201ENST00000365413 134 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 SNORD18B-201ENST00000365659 72 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 MIR582-201ENST00000365731 98 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 RNU6-639P-201ENST00000384074 107 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 MIR518B-201ENST00000385127 83 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 MIR548H3-201ENST00000408771 118 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 MIR4493-201ENST00000584016 73 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 MIR6844-201ENST00000637122 62 ntBASIC-0.91□□□□□ -2.56
VCX3AQ9NNX9 RNY1P11-201ENST00000363759 113 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 MIR548E-201ENST00000408287 88 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 RNU6-735P-201ENST00000410612 107 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 RNU2-38P-201ENST00000410856 79 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 SPINT5P-201ENST00000448174 155 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 MIR3646-201ENST00000578301 84 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 MIR4802-201ENST00000581881 80 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 MIR4801-201ENST00000582704 82 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 MIR5704-201ENST00000584029 77 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 MIR1255B1-201ENST00000636325 63 ntBASIC-0.92□□□□□ -2.56
VCX3AQ9NNX9 RNU6-238P-201ENST00000363313 106 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 RNU6-476P-201ENST00000384726 107 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 MT-TI-201ENST00000387365 69 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 RNU6-466P-201ENST00000391224 103 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 RNU6-935P-201ENST00000410371 100 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 MTND2P23-201ENST00000422990 651 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 AC097510.1-201ENST00000510945 133 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 MIR4696-201ENST00000581431 70 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 MIR3163-201ENST00000581592 73 ntBASIC-0.93□□□□□ -2.56
VCX3AQ9NNX9 RNU6-664P-201ENST00000362381 107 ntBASIC-0.94□□□□□ -2.56
VCX3AQ9NNX9 RNU6-54P-201ENST00000365563 107 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 286.4 ms