Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 Y_RNA.213-201ENST00000364178 111 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 SNORA2A-201ENST00000383885 135 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.555-201ENST00000384673 110 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 MIR599-201ENST00000385069 95 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 MIR519A1-201ENST00000385257 85 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 SNORD41.1-201ENST00000391000 69 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 RNU7-195P-201ENST00000458793 62 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 RNU7-106P-201ENST00000459514 67 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 RNU6-346P-201ENST00000516288 111 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 RNU6-521P-201ENST00000516663 105 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 RNU6-1234P-201ENST00000516877 103 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 U7.2-201ENST00000607576 63 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 AL162376.1-201ENST00000624117 175 ntBASIC0.09□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 SNORA42.1-201ENST00000363515 137 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 MIR759-201ENST00000390224 91 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 RNU6-127P-201ENST00000390897 107 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 MIR548L-201ENST00000408303 86 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 SNORD63B-201ENST00000411005 70 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 AL158147.1-201ENST00000443970 75 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 AC104408.1-201ENST00000605241 170 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 AC067863.3-201ENST00000624172 122 ntBASIC0.08□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.360-201ENST00000365512 102 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.362-201ENST00000365518 110 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 RNU6-571P-201ENST00000384128 107 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.464-201ENST00000384282 110 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 RNU6-269P-201ENST00000391077 97 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 SNORA7.5-201ENST00000410672 110 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 RPL39P34-201ENST00000477141 156 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 RNU6-255P-201ENST00000516957 105 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
NXF3Q9H4D5 SNORD114-5-201ENST00000362928 70 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 RNA5SP214-201ENST00000363378 118 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.180-201ENST00000363867 113 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 RNA5SP128-201ENST00000365305 116 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.488-201ENST00000384403 102 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.525-201ENST00000384570 113 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.528-201ENST00000384575 108 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 AL353813.1-201ENST00000440700 253 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 RNU6-1212P-201ENST00000517023 104 ntBASIC0.06□□□□□ -2.4
NXF3Q9H4D5 RNU6-170P-201ENST00000362832 104 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 RNU6-1260P-201ENST00000362944 107 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.344-201ENST00000365381 112 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 MIR516A2-201ENST00000384888 90 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 MIR516A1-201ENST00000385033 90 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.630-201ENST00000411370 108 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 MTND4LP9-201ENST00000427694 174 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 RNU6-850P-201ENST00000516934 103 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 MIR5706-201ENST00000579841 80 ntBASIC0.05□□□□□ -2.4
NXF3Q9H4D5 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
NXF3Q9H4D5 RNA5SP257-201ENST00000363023 116 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 RNU6-524P-201ENST00000384270 107 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 MIR548D2-201ENST00000384955 97 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 MIR501-201ENST00000390204 84 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 AL161932.1-201ENST00000437408 146 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.809-201ENST00000516058 95 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 RNU7-200P-201ENST00000516105 62 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 RNU6-1061P-201ENST00000516530 99 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 MIR5190-201ENST00000581537 80 ntBASIC0.04□□□□□ -2.4
NXF3Q9H4D5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.04□□□□□ -2.4
NXF3Q9H4D5 SNORD38.2-201ENST00000384470 69 ntBASIC0.03□□□□□ -2.4
NXF3Q9H4D5 MIR593-201ENST00000384856 100 ntBASIC0.03□□□□□ -2.4
NXF3Q9H4D5 RNA5SP484-201ENST00000458857 111 ntBASIC0.03□□□□□ -2.4
NXF3Q9H4D5 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
NXF3Q9H4D5 AC073869.9-201ENST00000641610 120 ntBASIC0.03□□□□□ -2.4
NXF3Q9H4D5 Y_RNA.35-201ENST00000362601 101 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 RNU6-363P-201ENST00000362895 105 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 Y_RNA.323-201ENST00000365157 109 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 SNORD58C-201ENST00000365223 64 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 Y_RNA.342-201ENST00000365352 113 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 Y_RNA.506-201ENST00000384494 102 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 RNU6-257P-201ENST00000410238 98 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 RNU6-1265P-201ENST00000516342 103 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 RNU6-782P-201ENST00000516852 104 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 RNU6-1006P-201ENST00000516998 103 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 MIR3920-201ENST00000581751 86 ntBASIC0.02□□□□□ -2.41
NXF3Q9H4D5 RNU6-1313P-201ENST00000362622 102 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 RNY4P6-201ENST00000363667 96 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 RNY1P5-201ENST00000383890 115 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 MIR610-201ENST00000385139 96 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 RNU7-107P-201ENST00000459121 61 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 MTND5P40-201ENST00000559945 246 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 NAMPTP3-201ENST00000569273 224 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 MIR548AG2-201ENST00000581228 64 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 MIR4743-201ENST00000584576 69 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 U7.6-201ENST00000610841 64 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 uc_338.28-201ENST00000612082 187 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 AC025166.1-201ENST00000612411 163 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 AL512310.12-203ENST00000640543 90 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 MTND5P18-201ENST00000445624 1801 ntBASIC0.01□□□□□ -2.41
NXF3Q9H4D5 Y_RNA.343-201ENST00000365354 112 ntBASIC0□□□□□ -2.41
NXF3Q9H4D5 Y_RNA.568-201ENST00000384742 113 ntBASIC0□□□□□ -2.41
NXF3Q9H4D5 SNORA40-201ENST00000388090 126 ntBASIC0□□□□□ -2.41
NXF3Q9H4D5 RNU6-1018P-201ENST00000516577 106 ntBASIC0□□□□□ -2.41
NXF3Q9H4D5 MIR3671-201ENST00000580455 88 ntBASIC0□□□□□ -2.41
NXF3Q9H4D5 RNU6-509P-201ENST00000363519 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 218.8 ms