Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC091304.10-201ENST00000641554 121 ntBASIC0.33□□□□□ -2.36
CDX2Q99626 MIR18A-201ENST00000362310 71 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 RNU6-1290P-201ENST00000362957 109 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 SNORD115-19-201ENST00000363098 82 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 SNORD115-18-201ENST00000363293 82 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 Y_RNA.185-201ENST00000363894 100 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 SNORD115-17-201ENST00000364612 82 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 Y_RNA.328-201ENST00000365208 113 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 SNORD113-1-201ENST00000365321 69 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 RNU6-364P-201ENST00000384387 107 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 MIR140-201ENST00000385282 100 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 RNA5SP222-201ENST00000411039 105 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 AL161932.1-201ENST00000437408 146 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 RNU6-758P-201ENST00000516292 89 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 AC007012.1-201ENST00000567192 175 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 uc_338.16-201ENST00000621804 95 ntBASIC0.32□□□□□ -2.36
CDX2Q99626 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.32□□□□□ -2.36
CDX2Q99626 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-363P-201ENST00000362895 105 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNA5SP98-201ENST00000363158 137 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 SNORD114-10-201ENST00000363409 72 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNA5SP205-201ENST00000364653 136 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 SNORD114-15-201ENST00000364687 72 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 MIR539-201ENST00000365690 78 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 MIR577-201ENST00000385196 96 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-816P-201ENST00000390914 107 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1154P-201ENST00000391001 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1268P-201ENST00000391214 107 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1239P-201ENST00000391310 107 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 SNORD100-201ENST00000408573 76 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-447P-201ENST00000410293 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1118P-201ENST00000410382 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1076P-201ENST00000410397 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-355P-201ENST00000410427 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-791P-201ENST00000410467 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-705P-201ENST00000410601 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1100P-201ENST00000410691 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-860P-201ENST00000410860 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNA5SP136-201ENST00000410906 107 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-1217P-201ENST00000411276 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-785P-201ENST00000411324 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU7-48P-201ENST00000458875 63 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 TRAJ51-201ENST00000504127 63 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 SNORA68.3-201ENST00000515906 83 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 RNU6-448P-201ENST00000517052 107 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 DEFB131E-201ENST00000532329 154 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 MIR3678-201ENST00000578455 94 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 MIR3163-201ENST00000581592 73 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 U6.90-201ENST00000614007 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 U6.70-201ENST00000620287 104 ntBASIC0.31□□□□□ -2.36
CDX2Q99626 U8.6-201ENST00000364939 135 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 Y_RNA.360-201ENST00000365512 102 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 SNORA36.2-201ENST00000384004 127 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 Y_RNA.536-201ENST00000384621 113 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 Y_RNA.563-201ENST00000384707 108 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 RNU6-535P-201ENST00000384722 107 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 MIR548A3-201ENST00000385297 97 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
CDX2Q99626 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.3□□□□□ -2.36
CDX2Q99626 MIRLET7D-201ENST00000362263 87 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 SNORA63.4-201ENST00000362763 126 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 Y_RNA.155-201ENST00000363632 101 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 Y_RNA.213-201ENST00000364178 111 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNA5SP517-201ENST00000364724 117 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-1201P-201ENST00000384227 107 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-1144P-201ENST00000384247 104 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 SNORD116-21-201ENST00000384507 92 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-1117P-201ENST00000384525 104 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 SNORD20-201ENST00000384550 80 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 MIR516A2-201ENST00000384888 90 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 MIR516A1-201ENST00000385033 90 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-893P-201ENST00000458841 100 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-1194P-201ENST00000516208 104 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-109P-201ENST00000516364 107 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 RNU6-184P-201ENST00000516514 107 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 Y_RNA.697-201ENST00000516776 113 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 AC068339.1-201ENST00000526965 141 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 MIR4752-201ENST00000579672 72 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 AL162726.3-218ENST00000636401 95 ntBASIC0.29□□□□□ -2.36
CDX2Q99626 Y_RNA.49-201ENST00000362714 112 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-1099P-201ENST00000363533 107 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 Y_RNA.221-201ENST00000364248 96 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-1163P-201ENST00000364516 107 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 Y_RNA.299-201ENST00000364973 94 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 Y_RNA.346-201ENST00000365385 112 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-476P-201ENST00000384726 107 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNY4P18-201ENST00000391107 89 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 SNORD77B-201ENST00000391112 67 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-554P-201ENST00000410466 106 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 AC008267.6-201ENST00000441664 139 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 AC109327.2-201ENST00000448339 378 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RPL39P25-201ENST00000449384 154 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU7-195P-201ENST00000458793 62 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-1232P-201ENST00000516299 86 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-795P-201ENST00000516323 103 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-589P-201ENST00000516485 107 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNA5SP94-201ENST00000516917 108 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 RNU6-850P-201ENST00000516934 103 ntBASIC0.28□□□□□ -2.36
CDX2Q99626 SNORA25.18-201ENST00000607153 114 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 241.3 ms