Protein–RNA interactions for Protein: Q96DT6

ATG4C, Cysteine protease ATG4C, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4CQ96DT6 MIR96-201ENST00000362288 78 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 RNU6-369P-201ENST00000362515 102 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 RNU6-1254P-201ENST00000391266 104 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 Y_RNA.593-201ENST00000410292 98 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 Y_RNA.609-201ENST00000410669 89 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 Y_RNA.697-201ENST00000516776 113 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 IGLL4P-201ENST00000614590 133 ntBASIC1.47□□□□□ -2.17
ATG4CQ96DT6 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATG4CQ96DT6 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 Y_RNA.536-201ENST00000384621 113 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 MIR516A2-201ENST00000384888 90 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 MIR516A1-201ENST00000385033 90 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 RNU1-119P-201ENST00000391122 165 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 RNU6-243P-201ENST00000391140 107 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 MIR1827-201ENST00000408549 66 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 RNY4P29-201ENST00000410801 97 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 RNU7-56P-201ENST00000458744 62 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 RNU7-102P-201ENST00000458948 62 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 MIR4668-201ENST00000582284 70 ntBASIC1.46□□□□□ -2.18
ATG4CQ96DT6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ATG4CQ96DT6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.46□□□□□ -2.18
ATG4CQ96DT6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.45□□□□□ -2.18
ATG4CQ96DT6 RNY1P1-201ENST00000364372 112 ntBASIC1.45□□□□□ -2.18
ATG4CQ96DT6 RNY1P4-201ENST00000384595 115 ntBASIC1.45□□□□□ -2.18
ATG4CQ96DT6 SNORD63B-201ENST00000411005 70 ntBASIC1.45□□□□□ -2.18
ATG4CQ96DT6 AL161932.1-201ENST00000437408 146 ntBASIC1.45□□□□□ -2.18
ATG4CQ96DT6 AL136317.1-201ENST00000612653 226 ntBASIC1.45□□□□□ -2.18
ATG4CQ96DT6 SNORD114-22-201ENST00000365423 72 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 MIR520F-201ENST00000384824 87 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 RNU6-519P-201ENST00000410590 108 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 RNU6-402P-201ENST00000410678 103 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 FABP5P4-201ENST00000437203 171 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 RPS29P23-201ENST00000458635 123 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 AC068338.1-201ENST00000565567 176 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 MIR4452-201ENST00000583004 71 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 AC062037.1-201ENST00000605302 128 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.44□□□□□ -2.18
ATG4CQ96DT6 MIR494-201ENST00000349529 81 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 SNORD36A-201ENST00000362874 73 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 RNU6-675P-201ENST00000384236 104 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 MIR19B1-201ENST00000384829 87 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 RNU7-106P-201ENST00000459514 67 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 RN7SKP12-201ENST00000516275 143 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 AP003327.1-201ENST00000529684 127 ntBASIC1.43□□□□□ -2.18
ATG4CQ96DT6 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
ATG4CQ96DT6 SNORD114-27-201ENST00000363766 70 ntBASIC1.42□□□□□ -2.18
ATG4CQ96DT6 Y_RNA.620-201ENST00000411009 88 ntBASIC1.42□□□□□ -2.18
ATG4CQ96DT6 AC092628.1-201ENST00000436250 252 ntBASIC1.42□□□□□ -2.18
ATG4CQ96DT6 Y_RNA.648-201ENST00000459455 110 ntBASIC1.42□□□□□ -2.18
ATG4CQ96DT6 TRAJ51-201ENST00000504127 63 ntBASIC1.42□□□□□ -2.18
ATG4CQ96DT6 AC019288.1-201ENST00000557918 224 ntBASIC1.42□□□□□ -2.18
ATG4CQ96DT6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
ATG4CQ96DT6 RNU6-219P-201ENST00000364728 107 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 RNU6-535P-201ENST00000384722 107 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 MIR489-201ENST00000384923 84 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 MIR519A1-201ENST00000385257 85 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 snoU13.18-201ENST00000459483 104 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 RNU6-1110P-201ENST00000516462 101 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 RNU6-448P-201ENST00000517052 107 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 AC138907.6-201ENST00000568401 126 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 AC138869.1-201ENST00000568623 124 ntBASIC1.41□□□□□ -2.18
ATG4CQ96DT6 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.41□□□□□ -2.18
ATG4CQ96DT6 SNORA25.8-201ENST00000364831 128 ntBASIC1.4□□□□□ -2.19
ATG4CQ96DT6 Y_RNA.388-201ENST00000383919 113 ntBASIC1.4□□□□□ -2.19
ATG4CQ96DT6 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.4□□□□□ -2.19
ATG4CQ96DT6 AC008608.1-201ENST00000603910 127 ntBASIC1.4□□□□□ -2.19
ATG4CQ96DT6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
ATG4CQ96DT6 RNU6-291P-201ENST00000384720 107 ntBASIC1.39□□□□□ -2.19
ATG4CQ96DT6 SNORD89-201ENST00000390981 114 ntBASIC1.39□□□□□ -2.19
ATG4CQ96DT6 RNU7-195P-201ENST00000458793 62 ntBASIC1.39□□□□□ -2.19
ATG4CQ96DT6 U7.7-201ENST00000459276 60 ntBASIC1.39□□□□□ -2.19
ATG4CQ96DT6 Y_RNA.809-201ENST00000516058 95 ntBASIC1.39□□□□□ -2.19
ATG4CQ96DT6 RMST_2.1-201ENST00000617263 136 ntBASIC1.39□□□□□ -2.19
ATG4CQ96DT6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
ATG4CQ96DT6 MIR26B-201ENST00000362251 77 ntBASIC1.38□□□□□ -2.19
ATG4CQ96DT6 RNU6-633P-201ENST00000362612 103 ntBASIC1.38□□□□□ -2.19
ATG4CQ96DT6 SNORD4B-201ENST00000459083 72 ntBASIC1.38□□□□□ -2.19
ATG4CQ96DT6 RNU6-267P-201ENST00000516714 103 ntBASIC1.38□□□□□ -2.19
ATG4CQ96DT6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.38□□□□□ -2.19
ATG4CQ96DT6 RNU1-93P-201ENST00000364704 169 ntBASIC1.37□□□□□ -2.19
ATG4CQ96DT6 RNU6-466P-201ENST00000391224 103 ntBASIC1.37□□□□□ -2.19
ATG4CQ96DT6 MIR942-201ENST00000401111 86 ntBASIC1.37□□□□□ -2.19
ATG4CQ96DT6 RNU6-1260P-201ENST00000362944 107 ntBASIC1.36□□□□□ -2.19
ATG4CQ96DT6 AC097635.1-201ENST00000450678 155 ntBASIC1.36□□□□□ -2.19
ATG4CQ96DT6 snoU13.11-201ENST00000459219 104 ntBASIC1.36□□□□□ -2.19
ATG4CQ96DT6 RNU6-65P-201ENST00000516332 98 ntBASIC1.36□□□□□ -2.19
ATG4CQ96DT6 MIR4536-1-201ENST00000583537 88 ntBASIC1.36□□□□□ -2.19
ATG4CQ96DT6 MIR6767-201ENST00000637302 66 ntBASIC1.36□□□□□ -2.19
ATG4CQ96DT6 RNU6-509P-201ENST00000363519 107 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 RNU6-242P-201ENST00000384359 107 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 RNU6-1152P-201ENST00000384576 107 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 MIR150-201ENST00000385048 84 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 MIR520H-201ENST00000385126 88 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 SNORD124-201ENST00000459577 104 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 AC022137.1-201ENST00000483735 151 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
ATG4CQ96DT6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms