Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MTRNR2L2-201ENST00000604882 87 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RC3H1Q5TC82 U6.81-201ENST00000612550 106 ntBASIC2.47□□□□□ -2.01
RC3H1Q5TC82 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
RC3H1Q5TC82 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RC3H1Q5TC82 AC104435.1-201ENST00000483483 166 ntBASIC2.46□□□□□ -2.02
RC3H1Q5TC82 RNU6-250P-201ENST00000516958 103 ntBASIC2.46□□□□□ -2.02
RC3H1Q5TC82 SNORA31.25-201ENST00000517242 134 ntBASIC2.46□□□□□ -2.02
RC3H1Q5TC82 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RC3H1Q5TC82 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
RC3H1Q5TC82 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RC3H1Q5TC82 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RC3H1Q5TC82 RNA5SP190-201ENST00000365222 118 ntBASIC2.45□□□□□ -2.02
RC3H1Q5TC82 MIR1185-1-201ENST00000408598 86 ntBASIC2.45□□□□□ -2.02
RC3H1Q5TC82 RNA5SP233-201ENST00000459153 113 ntBASIC2.45□□□□□ -2.02
RC3H1Q5TC82 MIR4255-201ENST00000579351 72 ntBASIC2.45□□□□□ -2.02
RC3H1Q5TC82 MIR4511-201ENST00000582784 87 ntBASIC2.45□□□□□ -2.02
RC3H1Q5TC82 AC103706.3-201ENST00000636297 85 ntBASIC2.45□□□□□ -2.02
RC3H1Q5TC82 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
RC3H1Q5TC82 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H1Q5TC82 AL596028.1-201ENST00000326971 197 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 MIR378A-201ENST00000362177 66 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 RNU6-1216P-201ENST00000362590 107 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 RNU6-824P-201ENST00000363724 104 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 RNU6-654P-201ENST00000364373 107 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 SNORA24B-201ENST00000384176 131 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 RNU6-141P-201ENST00000410499 105 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 RNU6-947P-201ENST00000516264 106 ntBASIC2.44□□□□□ -2.02
RC3H1Q5TC82 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RC3H1Q5TC82 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RC3H1Q5TC82 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
RC3H1Q5TC82 SNORD116-24-201ENST00000384549 92 ntBASIC2.43□□□□□ -2.02
RC3H1Q5TC82 RNA5SP95-201ENST00000410319 137 ntBASIC2.43□□□□□ -2.02
RC3H1Q5TC82 RNU6-1054P-201ENST00000411293 104 ntBASIC2.43□□□□□ -2.02
RC3H1Q5TC82 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.43□□□□□ -2.02
RC3H1Q5TC82 SNORD113.1-201ENST00000363280 73 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 MIR9-3-201ENST00000385084 90 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 MIR1287-201ENST00000408492 90 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 RNU6-935P-201ENST00000410371 100 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 RNU6-1052P-201ENST00000411398 104 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 AC003989.2-201ENST00000440224 169 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 SNORD13-201ENST00000459299 104 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 RNU6-719P-201ENST00000516671 104 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 Y_RNA.697-201ENST00000516776 113 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 MIR6082-201ENST00000613604 109 ntBASIC2.42□□□□□ -2.02
RC3H1Q5TC82 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RC3H1Q5TC82 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RC3H1Q5TC82 MIR103A2-201ENST00000362154 78 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 Y_RNA.13-201ENST00000362403 112 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 RNA5SP264-201ENST00000363115 107 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 RNU6-321P-201ENST00000410912 106 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 AC097635.1-201ENST00000450678 155 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 RNU7-185P-201ENST00000459215 60 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 SNORA25.15-201ENST00000516487 89 ntBASIC2.41□□□□□ -2.02
RC3H1Q5TC82 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.41□□□□□ -2.02
RC3H1Q5TC82 AC110620.1-201ENST00000416042 228 ntBASIC2.4□□□□□ -2.03
RC3H1Q5TC82 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.4□□□□□ -2.03
RC3H1Q5TC82 AC023934.1-201ENST00000574529 2389 ntBASIC2.4□□□□□ -2.03
RC3H1Q5TC82 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RC3H1Q5TC82 MIR451A-201ENST00000385059 72 ntBASIC2.39□□□□□ -2.03
RC3H1Q5TC82 AP1B1P2-201ENST00000416196 106 ntBASIC2.39□□□□□ -2.03
RC3H1Q5TC82 AC015688.6-201ENST00000577737 104 ntBASIC2.39□□□□□ -2.03
RC3H1Q5TC82 AC084768.2-201ENST00000622736 221 ntBASIC2.39□□□□□ -2.03
RC3H1Q5TC82 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.39□□□□□ -2.03
RC3H1Q5TC82 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RC3H1Q5TC82 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RC3H1Q5TC82 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RC3H1Q5TC82 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RC3H1Q5TC82 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
RC3H1Q5TC82 RNU6-439P-201ENST00000384188 106 ntBASIC2.38□□□□□ -2.03
RC3H1Q5TC82 RNU6-604P-201ENST00000390917 100 ntBASIC2.38□□□□□ -2.03
RC3H1Q5TC82 SNORA67.5-201ENST00000391036 107 ntBASIC2.38□□□□□ -2.03
RC3H1Q5TC82 RNU6-765P-201ENST00000516916 99 ntBASIC2.38□□□□□ -2.03
RC3H1Q5TC82 AP000553.5-201ENST00000641933 54 ntBASIC2.38□□□□□ -2.03
RC3H1Q5TC82 RNU6-669P-201ENST00000365575 107 ntBASIC2.37□□□□□ -2.03
RC3H1Q5TC82 MIR1257-201ENST00000408490 117 ntBASIC2.37□□□□□ -2.03
RC3H1Q5TC82 MIR4448-201ENST00000584360 86 ntBASIC2.37□□□□□ -2.03
RC3H1Q5TC82 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
RC3H1Q5TC82 MIR599-201ENST00000385069 95 ntBASIC2.36□□□□□ -2.03
RC3H1Q5TC82 RNU4-62P-201ENST00000410125 130 ntBASIC2.36□□□□□ -2.03
RC3H1Q5TC82 AC138907.6-201ENST00000568401 126 ntBASIC2.36□□□□□ -2.03
RC3H1Q5TC82 AC138869.1-201ENST00000568623 124 ntBASIC2.36□□□□□ -2.03
RC3H1Q5TC82 MIR7111-201ENST00000619751 72 ntBASIC2.36□□□□□ -2.03
RC3H1Q5TC82 RNU6-614P-201ENST00000384369 107 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 RNU6-1177P-201ENST00000391058 104 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 AL356379.1-201ENST00000414105 126 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 RNU6-1265P-201ENST00000516342 103 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 SNORA77B-201ENST00000578179 125 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 AL359821.1-201ENST00000605519 182 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 U6.59-201ENST00000615686 107 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 AC069503.3-201ENST00000618674 145 ntBASIC2.35□□□□□ -2.03
RC3H1Q5TC82 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
RC3H1Q5TC82 RNA5SP212-201ENST00000391223 107 ntBASIC2.34□□□□□ -2.03
RC3H1Q5TC82 snoU13.21-201ENST00000459368 105 ntBASIC2.34□□□□□ -2.03
RC3H1Q5TC82 RNU6-752P-201ENST00000516376 102 ntBASIC2.34□□□□□ -2.03
RC3H1Q5TC82 MIR4773-1-201ENST00000637203 78 ntBASIC2.34□□□□□ -2.03
RC3H1Q5TC82 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RC3H1Q5TC82 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RC3H1Q5TC82 MIR633-201ENST00000384821 98 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms