Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR2115-201ENST00000516657 100 ntBASIC2.49□□□□□ -2.01
CTC1Q2NKJ3 SNORA31.17-201ENST00000516953 127 ntBASIC2.49□□□□□ -2.01
CTC1Q2NKJ3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CTC1Q2NKJ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 RNA5SP259-201ENST00000365541 109 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 MT-TN-201ENST00000387400 73 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 SNORD23.1-201ENST00000408212 104 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 RPL23AP42-201ENST00000471152 471 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 MIR3938-201ENST00000582157 103 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 MIR5007-201ENST00000583098 95 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 MIR6516-201ENST00000630554 81 ntBASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CTC1Q2NKJ3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTC1Q2NKJ3 RN7SL274P-201ENST00000492268 272 ntBASIC2.47□□□□□ -2.01
CTC1Q2NKJ3 MIR6873-201ENST00000622788 63 ntBASIC2.47□□□□□ -2.01
CTC1Q2NKJ3 RNU6-1312P-201ENST00000362425 108 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 SNORA64-201ENST00000384674 134 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 MIR144-201ENST00000384886 86 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 RNA5SP212-201ENST00000391223 107 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 AC004965.1-201ENST00000413033 213 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 RNU6-1265P-201ENST00000516342 103 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 MIR514B-201ENST00000516774 80 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 MIR6082-201ENST00000613604 109 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 MIR6509-201ENST00000614603 85 ntBASIC2.46□□□□□ -2.02
CTC1Q2NKJ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTC1Q2NKJ3 MIR21-201ENST00000362134 72 ntBASIC2.45□□□□□ -2.02
CTC1Q2NKJ3 snoU13.25-201ENST00000458945 104 ntBASIC2.45□□□□□ -2.02
CTC1Q2NKJ3 NAMPTP3-201ENST00000569273 224 ntBASIC2.45□□□□□ -2.02
CTC1Q2NKJ3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.45□□□□□ -2.02
CTC1Q2NKJ3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 RNU6-645P-201ENST00000364649 106 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 RNU6-1039P-201ENST00000383931 107 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 SNORA75.1-201ENST00000391130 148 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 AC055731.1-201ENST00000474387 401 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 RNU6-287P-201ENST00000516230 98 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 RNU6-122P-201ENST00000516818 107 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 MIR219B-201ENST00000637023 88 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 AC073869.9-201ENST00000641610 120 ntBASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CTC1Q2NKJ3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 U3.27-201ENST00000391237 200 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 SNORD75.2-201ENST00000408784 58 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 MIR18B-201ENST00000454574 71 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 RNU6-947P-201ENST00000516264 106 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 AC103810.8-201ENST00000607347 118 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 MIR6895-201ENST00000613497 78 ntBASIC2.43□□□□□ -2.02
CTC1Q2NKJ3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.42□□□□□ -2.02
CTC1Q2NKJ3 MIR194-1-201ENST00000384892 85 ntBASIC2.42□□□□□ -2.02
CTC1Q2NKJ3 SNORA26.9-201ENST00000391322 122 ntBASIC2.42□□□□□ -2.02
CTC1Q2NKJ3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.42□□□□□ -2.02
CTC1Q2NKJ3 RNU7-185P-201ENST00000459215 60 ntBASIC2.42□□□□□ -2.02
CTC1Q2NKJ3 snoU13.21-201ENST00000459368 105 ntBASIC2.42□□□□□ -2.02
CTC1Q2NKJ3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CTC1Q2NKJ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
CTC1Q2NKJ3 MIR513A1-201ENST00000385138 129 ntBASIC2.41□□□□□ -2.02
CTC1Q2NKJ3 AC138907.6-201ENST00000568401 126 ntBASIC2.41□□□□□ -2.02
CTC1Q2NKJ3 AC138869.1-201ENST00000568623 124 ntBASIC2.41□□□□□ -2.02
CTC1Q2NKJ3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.4□□□□□ -2.02
CTC1Q2NKJ3 MIR377-201ENST00000362145 69 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 Y_RNA.379-201ENST00000365653 102 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 SNORA67.3-201ENST00000384366 140 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 MIR1257-201ENST00000408490 117 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 MIR1185-1-201ENST00000408598 86 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 RNU6-295P-201ENST00000516901 104 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 AC080100.1-201ENST00000624239 5356 ntBASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CTC1Q2NKJ3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 RNA5SP245-201ENST00000364239 121 ntBASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 MIR548V-201ENST00000584165 80 ntBASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 RNU6-92P-201ENST00000605893 104 ntBASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CTC1Q2NKJ3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CTC1Q2NKJ3 ZNF355P-201ENST00000427301 3216 ntBASIC2.38□□□□□ -2.03
CTC1Q2NKJ3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.38□□□□□ -2.03
CTC1Q2NKJ3 MIR4498-201ENST00000577599 66 ntBASIC2.38□□□□□ -2.03
CTC1Q2NKJ3 MIR7111-201ENST00000619751 72 ntBASIC2.38□□□□□ -2.03
CTC1Q2NKJ3 RNU6-495P-201ENST00000362995 107 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 RNU6-753P-201ENST00000363926 107 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 SNORA6-201ENST00000384033 151 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 MIR221-201ENST00000385135 110 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 MIR548AD-201ENST00000584780 82 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 MIR3657-201ENST00000584818 117 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CTC1Q2NKJ3 MIR103A2-201ENST00000362154 78 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 SNORD60.1-201ENST00000362451 73 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 RNA5SP276-201ENST00000362580 94 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 RNU6-580P-201ENST00000365159 107 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 SNORD83.1-201ENST00000411362 77 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 JTBP1-201ENST00000441314 247 ntBASIC2.36□□□□□ -2.03
CTC1Q2NKJ3 RNU7-24P-201ENST00000458867 62 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms