Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 RNU6-392P-201ENST00000364926 101 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 RNU6-652P-201ENST00000365488 107 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 RNU6-279P-201ENST00000391297 101 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 SNORD111-201ENST00000408139 94 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 MIR1236-201ENST00000408340 102 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 SNORD100-201ENST00000408573 76 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 SNORD63B-201ENST00000411005 70 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 AL591704.2-201ENST00000421658 181 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 AC015818.7-201ENST00000428754 109 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 snoU13.11-201ENST00000459219 104 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 AC023827.1-201ENST00000569247 97 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 AC013244.2-201ENST00000603396 103 ntBASIC1.47□□□□□ -2.17
ITGA1P56199 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
ITGA1P56199 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
ITGA1P56199 RNU7-21P-201ENST00000459430 62 ntBASIC1.46□□□□□ -2.18
ITGA1P56199 RNU7-106P-201ENST00000459514 67 ntBASIC1.46□□□□□ -2.18
ITGA1P56199 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.46□□□□□ -2.18
ITGA1P56199 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
ITGA1P56199 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
ITGA1P56199 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
ITGA1P56199 Y_RNA.316-201ENST00000365118 111 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 SNORA80D-201ENST00000384488 135 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 MIR125B2-201ENST00000385128 89 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 RNU6-910P-201ENST00000390844 107 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.45□□□□□ -2.18
ITGA1P56199 MIR1323-201ENST00000408090 73 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 RNU6-765P-201ENST00000516916 99 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.45□□□□□ -2.18
ITGA1P56199 MIR548H5-201ENST00000580314 60 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 RNU7-10P-201ENST00000607194 63 ntBASIC1.45□□□□□ -2.18
ITGA1P56199 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
ITGA1P56199 SNORA7.1-201ENST00000363750 139 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 Y_RNA.536-201ENST00000384621 113 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 MIR635-201ENST00000384830 98 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 RNU6-466P-201ENST00000391224 103 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 MIR1276-201ENST00000408707 83 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 snoU13.18-201ENST00000459483 104 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 RNU6-857P-201ENST00000515893 110 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 RNU7-40P-201ENST00000516397 64 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 RNU7-153P-201ENST00000516455 62 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 MIR6504-201ENST00000613520 61 ntBASIC1.44□□□□□ -2.18
ITGA1P56199 Y_RNA.42-201ENST00000362660 108 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 Y_RNA.283-201ENST00000364798 112 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 MIR489-201ENST00000384923 84 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 RPS26P5-201ENST00000418544 335 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 RNU7-90P-201ENST00000459216 62 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 TRAJ51-201ENST00000504127 63 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 RNU6-65P-201ENST00000516332 98 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 AC140658.3-201ENST00000567603 271 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 MIR4536-1-201ENST00000583537 88 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
ITGA1P56199 Y_RNA.56-201ENST00000362798 112 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 MIR519A1-201ENST00000385257 85 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 SNORD79.1-201ENST00000516069 84 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 RNU7-156P-201ENST00000517214 74 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 MIR4676-201ENST00000583078 72 ntBASIC1.42□□□□□ -2.18
ITGA1P56199 Y_RNA.244-201ENST00000364484 109 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
ITGA1P56199 RNU6-811P-201ENST00000384069 107 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 RNU6-994P-201ENST00000410507 111 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 AL354695.1-201ENST00000427935 228 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.41□□□□□ -2.18
ITGA1P56199 AC092628.1-201ENST00000436250 252 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 RNU7-195P-201ENST00000458793 62 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 RNU6-75P-201ENST00000515944 104 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 Y_RNA.697-201ENST00000516776 113 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 AL157834.3-201ENST00000615543 103 ntBASIC1.41□□□□□ -2.18
ITGA1P56199 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ITGA1P56199 RNU6-24P-201ENST00000384440 107 ntBASIC1.4□□□□□ -2.19
ITGA1P56199 SNORA25.13-201ENST00000516395 103 ntBASIC1.4□□□□□ -2.19
ITGA1P56199 SNORD92-201ENST00000585078 85 ntBASIC1.4□□□□□ -2.19
ITGA1P56199 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
ITGA1P56199 RNU6-957P-201ENST00000363652 99 ntBASIC1.39□□□□□ -2.19
ITGA1P56199 RNU6-364P-201ENST00000384387 107 ntBASIC1.39□□□□□ -2.19
ITGA1P56199 MIR938-201ENST00000401216 83 ntBASIC1.39□□□□□ -2.19
ITGA1P56199 Y_RNA.809-201ENST00000516058 95 ntBASIC1.39□□□□□ -2.19
ITGA1P56199 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.39□□□□□ -2.19
ITGA1P56199 RNU6-369P-201ENST00000362515 102 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 RNU6-1260P-201ENST00000362944 107 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 RNA5SP292-201ENST00000390974 118 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 RNU6-448P-201ENST00000517052 107 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 SNORA70.22-201ENST00000517160 124 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 MIR4796-201ENST00000580742 81 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 MIR4712-201ENST00000583750 82 ntBASIC1.38□□□□□ -2.19
ITGA1P56199 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.38□□□□□ -2.19
ITGA1P56199 Y_RNA.94-201ENST00000363068 106 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 RNU6-132P-201ENST00000383863 107 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 MIR548U-201ENST00000390728 81 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 AC097635.1-201ENST00000450678 155 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 RNA5SP61-201ENST00000516453 100 ntBASIC1.37□□□□□ -2.19
ITGA1P56199 MIR3064-201ENST00000581130 66 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 177.1 ms