Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MIR1263-201ENST00000408324 86 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 RNU7-197P-201ENST00000458836 62 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 MIR548X2-201ENST00000579776 100 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 MIR3163-201ENST00000581592 73 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 MIR499B-201ENST00000636498 73 ntBASIC0.04□□□□□ -2.4
LIMK1P53667 Y_RNA.114-201ENST00000363265 113 ntBASIC0.03□□□□□ -2.4
LIMK1P53667 RNU6-804P-201ENST00000384286 107 ntBASIC0.03□□□□□ -2.4
LIMK1P53667 SNORD114-31-201ENST00000363219 75 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 Y_RNA.213-201ENST00000364178 111 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 RNU6-647P-201ENST00000364243 107 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 SNORD114-9-201ENST00000364370 72 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 Y_RNA.362-201ENST00000365518 110 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 RNU6-1307P-201ENST00000391012 103 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 RNU6-394P-201ENST00000410735 107 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 RN7SKP19-201ENST00000516016 252 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 MIR376B-201ENST00000614515 100 ntBASIC0.02□□□□□ -2.41
LIMK1P53667 RNA5SP331-201ENST00000364986 107 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 SNORD38.2-201ENST00000384470 69 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 RNU6-127P-201ENST00000390897 107 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 RNU6-1265P-201ENST00000516342 103 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 MIR3144-201ENST00000579460 79 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 MIR4493-201ENST00000584016 73 ntBASIC0.01□□□□□ -2.41
LIMK1P53667 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
LIMK1P53667 RNA5SP403-201ENST00000363598 108 ntBASIC0□□□□□ -2.41
LIMK1P53667 Y_RNA.398-201ENST00000383952 99 ntBASIC0□□□□□ -2.41
LIMK1P53667 RNU6-30P-201ENST00000384561 107 ntBASIC0□□□□□ -2.41
LIMK1P53667 AC108059.2-201ENST00000434626 151 ntBASIC0□□□□□ -2.41
LIMK1P53667 AC097635.1-201ENST00000450678 155 ntBASIC0□□□□□ -2.41
LIMK1P53667 Y_RNA.809-201ENST00000516058 95 ntBASIC0□□□□□ -2.41
LIMK1P53667 RNU6-521P-201ENST00000516663 105 ntBASIC0□□□□□ -2.41
LIMK1P53667 MIR5706-201ENST00000579841 80 ntBASIC0□□□□□ -2.41
LIMK1P53667 U7.6-201ENST00000610841 64 ntBASIC0□□□□□ -2.41
LIMK1P53667 AC087741.2-201ENST00000619415 172 ntBASIC0□□□□□ -2.41
LIMK1P53667 RNU6-652P-201ENST00000365488 107 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 SNORD63B-201ENST00000411005 70 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 RNU7-195P-201ENST00000458793 62 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 MTND5P40-201ENST00000559945 246 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 AP001180.6-201ENST00000584918 159 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 AP001340.1-201ENST00000624405 217 ntBASIC-0.01□□□□□ -2.41
LIMK1P53667 RNU6-170P-201ENST00000362832 104 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 SNORD114-5-201ENST00000362928 70 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 RNA5SP368-201ENST00000364298 116 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 MIR34C-201ENST00000384831 77 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 MIR593-201ENST00000384856 100 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 MIR604-201ENST00000384880 94 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 RNA5SP136-201ENST00000410906 107 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 IGKV1-22-201ENST00000524313 326 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 RNU1-29P-201ENST00000606574 126 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 AL162376.1-201ENST00000624117 175 ntBASIC-0.02□□□□□ -2.41
LIMK1P53667 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.03□□□□□ -2.41
LIMK1P53667 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.03□□□□□ -2.41
LIMK1P53667 RNU6-571P-201ENST00000384128 107 ntBASIC-0.03□□□□□ -2.41
LIMK1P53667 RNU6-269P-201ENST00000391077 97 ntBASIC-0.03□□□□□ -2.41
LIMK1P53667 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.03□□□□□ -2.41
LIMK1P53667 RNU6V-201ENST00000384105 107 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 MT-TI-201ENST00000387365 69 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 SNORA7.5-201ENST00000410672 110 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 RNU7-13P-201ENST00000516413 62 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 AC090425.1-201ENST00000610007 140 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 AL512310.12-203ENST00000640543 90 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 AC073869.9-201ENST00000641610 120 ntBASIC-0.04□□□□□ -2.42
LIMK1P53667 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 SNORD41.1-201ENST00000391000 69 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 MIR892B-201ENST00000401279 77 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 RNU6-850P-201ENST00000516934 103 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 AC108676.2-201ENST00000605225 163 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 U7.2-201ENST00000607576 63 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 SNORA70.25-201ENST00000612741 95 ntBASIC-0.05□□□□□ -2.42
LIMK1P53667 SNORD115-19-201ENST00000363098 82 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 SNORD115-18-201ENST00000363293 82 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 RNU6-509P-201ENST00000363519 107 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 SNORD115-17-201ENST00000364612 82 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 RNU6-524P-201ENST00000384270 107 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 MIR145-201ENST00000384967 88 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 AL158147.1-201ENST00000443970 75 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 AC104692.1-201ENST00000472406 90 ntBASIC-0.06□□□□□ -2.42
LIMK1P53667 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
LIMK1P53667 MIR548H2-201ENST00000408874 88 ntBASIC-0.07□□□□□ -2.42
LIMK1P53667 AC006210.1-201ENST00000424882 111 ntBASIC-0.07□□□□□ -2.42
LIMK1P53667 RNU6-782P-201ENST00000516852 104 ntBASIC-0.07□□□□□ -2.42
LIMK1P53667 AC141557.1-201ENST00000540982 400 ntBASIC-0.07□□□□□ -2.42
LIMK1P53667 FTX_2.1-201ENST00000618816 94 ntBASIC-0.07□□□□□ -2.42
LIMK1P53667 MIR1255B1-201ENST00000636325 63 ntBASIC-0.07□□□□□ -2.42
LIMK1P53667 RNU6-886P-201ENST00000384319 105 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 SNORD110-201ENST00000408189 75 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 SPINT5P-201ENST00000448174 155 ntBASIC-0.08□□□□□ -2.42
LIMK1P53667 RNU7-74P-201ENST00000459104 62 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 169.1 ms