Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 MIR7-2-201ENST00000384970 110 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 Y_RNA.611-201ENST00000410682 108 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 RNU7-156P-201ENST00000517214 74 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 MIR4676-201ENST00000583078 72 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 MIR1245B-201ENST00000636115 69 ntBASIC1.44□□□□□ -2.18
SLC6A11P48066 RNU6-997P-201ENST00000384725 107 ntBASIC1.43□□□□□ -2.18
SLC6A11P48066 SNORD100-201ENST00000408573 76 ntBASIC1.43□□□□□ -2.18
SLC6A11P48066 MIR100-201ENST00000385259 80 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNU6-243P-201ENST00000391140 107 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNU6-1254P-201ENST00000391266 104 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 SNORD63B-201ENST00000411005 70 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNA5SP220-201ENST00000516298 104 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 RNU6-977P-201ENST00000516411 103 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 Y_RNA.697-201ENST00000516776 113 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 MIR4452-201ENST00000583004 71 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 MIR6734-201ENST00000621166 68 ntBASIC1.42□□□□□ -2.18
SLC6A11P48066 Y_RNA.219-201ENST00000364232 113 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 MIR635-201ENST00000384830 98 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 MIR938-201ENST00000401216 83 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 AL161932.1-201ENST00000437408 146 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 AC067940.1-201ENST00000458411 300 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 AP003327.1-201ENST00000529684 127 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.41□□□□□ -2.18
SLC6A11P48066 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 Y_RNA.42-201ENST00000362660 108 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 RNU6-509P-201ENST00000363519 107 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 Y_RNA.536-201ENST00000384621 113 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 RNU1-123P-201ENST00000458950 160 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 RNU7-106P-201ENST00000459514 67 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 MIR548H5-201ENST00000580314 60 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 MIR5588-201ENST00000581890 63 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.4□□□□□ -2.19
SLC6A11P48066 AC027335.2-201ENST00000624030 375 ntBASIC1.4□□□□□ -2.19
SLC6A11P48066 MIR1-1-201ENST00000362147 71 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6-633P-201ENST00000362612 103 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU4-32P-201ENST00000363404 141 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 SNORD115-27-201ENST00000364430 82 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6-1276P-201ENST00000365372 104 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 snoU13.11-201ENST00000459219 104 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 Y_RNA.648-201ENST00000459455 110 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 TRAJ51-201ENST00000504127 63 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU6-765P-201ENST00000516916 99 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 RNU7-10P-201ENST00000607194 63 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 MIR548BB-201ENST00000626714 66 ntBASIC1.39□□□□□ -2.19
SLC6A11P48066 SNORD36A-201ENST00000362874 73 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU6-979P-201ENST00000383896 107 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 SNORA25-201ENST00000384384 134 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 SNORD12-201ENST00000391002 90 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU7-195P-201ENST00000458793 62 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU7-102P-201ENST00000458948 62 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNA5SP102-201ENST00000516865 106 ntBASIC1.38□□□□□ -2.19
SLC6A11P48066 RNU6-369P-201ENST00000362515 102 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 Y_RNA.56-201ENST00000362798 112 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 MIR520F-201ENST00000384824 87 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 RNU6-1275P-201ENST00000391087 107 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 RNU6-466P-201ENST00000391224 103 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 AC002429.1-201ENST00000437672 148 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 MIR4804-201ENST00000581683 73 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 SNORD92-201ENST00000585078 85 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 MIR6078-201ENST00000611069 100 ntBASIC1.37□□□□□ -2.19
SLC6A11P48066 Y_RNA.426-201ENST00000384068 113 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU6-535P-201ENST00000384722 107 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 MIR519C-201ENST00000385053 87 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 SNORD78.1-201ENST00000390866 65 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU1-119P-201ENST00000391122 165 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 AC092628.1-201ENST00000436250 252 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU7-85P-201ENST00000458851 63 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 SNORD4B-201ENST00000459083 72 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 MIR3202-2-201ENST00000635980 79 ntBASIC1.36□□□□□ -2.19
SLC6A11P48066 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
SLC6A11P48066 RNU7-171P-201ENST00000459581 62 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNU6-65P-201ENST00000516332 98 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNA5SP61-201ENST00000516453 100 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 Y_RNA.685-201ENST00000516532 108 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNA5SP480-201ENST00000516840 109 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RNU6-448P-201ENST00000517052 107 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 AC008608.1-201ENST00000603910 127 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 RMST_2.1-201ENST00000617263 136 ntBASIC1.35□□□□□ -2.19
SLC6A11P48066 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SLC6A11P48066 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 SNORD115-37-201ENST00000363768 82 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 RNU6-1124P-201ENST00000384169 107 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SLC6A11P48066 Y_RNA.809-201ENST00000516058 95 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 MIR4536-1-201ENST00000583537 88 ntBASIC1.34□□□□□ -2.19
SLC6A11P48066 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SLC6A11P48066 Y_RNA.283-201ENST00000364798 112 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 RNU6-291P-201ENST00000384720 107 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 MIR1827-201ENST00000408549 66 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 AC019288.1-201ENST00000557918 224 ntBASIC1.33□□□□□ -2.2
SLC6A11P48066 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 429.1 ms