Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC092794.1-201ENST00000612734 582 ntBASIC-0.97□□□□□ -2.57
COL4A5P29400 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.98□□□□□ -2.57
COL4A5P29400 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.98□□□□□ -2.57
COL4A5P29400 MIR652-201ENST00000385278 98 ntBASIC-0.98□□□□□ -2.57
COL4A5P29400 RNU7-2P-201ENST00000516096 62 ntBASIC-0.98□□□□□ -2.57
COL4A5P29400 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 RNU6-103P-201ENST00000363686 107 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 RNU6-876P-201ENST00000391295 104 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 SNORA40.17-201ENST00000517256 115 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 MIR548AE1-201ENST00000583292 70 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 MIR548AE2-201ENST00000583456 67 ntBASIC-0.99□□□□□ -2.57
COL4A5P29400 snoU2_19.4-201ENST00000364329 80 ntBASIC-1□□□□□ -2.57
COL4A5P29400 SNORD114-17-201ENST00000364699 75 ntBASIC-1□□□□□ -2.57
COL4A5P29400 SNORD77B-201ENST00000391112 67 ntBASIC-1□□□□□ -2.57
COL4A5P29400 RNU6-243P-201ENST00000391140 107 ntBASIC-1□□□□□ -2.57
COL4A5P29400 AC113618.1-201ENST00000416747 285 ntBASIC-1□□□□□ -2.57
COL4A5P29400 Z83846.1-201ENST00000446798 265 ntBASIC-1□□□□□ -2.57
COL4A5P29400 RNY3P15-201ENST00000516297 97 ntBASIC-1□□□□□ -2.57
COL4A5P29400 SNORA40.15-201ENST00000516884 107 ntBASIC-1□□□□□ -2.57
COL4A5P29400 MIR4520-1-201ENST00000582609 70 ntBASIC-1□□□□□ -2.57
COL4A5P29400 snoR1.1-201ENST00000628177 80 ntBASIC-1□□□□□ -2.57
COL4A5P29400 Y_RNA.127-201ENST00000363386 109 ntBASIC-1□□□□□ -2.57
COL4A5P29400 RNU6-226P-201ENST00000363778 107 ntBASIC-1□□□□□ -2.57
COL4A5P29400 Y_RNA.346-201ENST00000365385 112 ntBASIC-1□□□□□ -2.57
COL4A5P29400 Y_RNA.352-201ENST00000365439 102 ntBASIC-1□□□□□ -2.57
COL4A5P29400 SNORD38.2-201ENST00000384470 69 ntBASIC-1□□□□□ -2.57
COL4A5P29400 Y_RNA.601-201ENST00000410500 113 ntBASIC-1□□□□□ -2.57
COL4A5P29400 RNU6-732P-201ENST00000516033 103 ntBASIC-1□□□□□ -2.57
COL4A5P29400 RNU6-479P-201ENST00000516348 105 ntBASIC-1□□□□□ -2.57
COL4A5P29400 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1□□□□□ -2.57
COL4A5P29400 AC138907.4-201ENST00000570107 226 ntBASIC-1□□□□□ -2.57
COL4A5P29400 MIR548AG2-201ENST00000581228 64 ntBASIC-1□□□□□ -2.57
COL4A5P29400 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 MIR889-201ENST00000401280 79 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 AC022028.1-201ENST00000412054 408 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 MIR5704-201ENST00000584029 77 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 AL353803.5-201ENST00000599815 141 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 AC021443.1-201ENST00000604478 211 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 AC132825.6-201ENST00000638861 357 ntBASIC-1.01□□□□□ -2.57
COL4A5P29400 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.02□□□□□ -2.57
COL4A5P29400 snoU13.13-201ENST00000458842 104 ntBASIC-1.02□□□□□ -2.57
COL4A5P29400 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.02□□□□□ -2.57
COL4A5P29400 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.02□□□□□ -2.57
COL4A5P29400 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.02□□□□□ -2.57
COL4A5P29400 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.02□□□□□ -2.57
COL4A5P29400 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.03□□□□□ -2.57
COL4A5P29400 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.03□□□□□ -2.57
COL4A5P29400 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.03□□□□□ -2.57
COL4A5P29400 RNU6-850P-201ENST00000516934 103 ntBASIC-1.03□□□□□ -2.57
COL4A5P29400 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.03□□□□□ -2.57
COL4A5P29400 YWHAEP3-201ENST00000582767 121 ntBASIC-1.03□□□□□ -2.57
COL4A5P29400 RNU6-823P-201ENST00000391042 103 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 Y_RNA.679-201ENST00000516416 91 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU2-35P-201ENST00000516446 142 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU2-4P-201ENST00000606190 192 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 SNORD115-25-201ENST00000362619 82 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU6-973P-201ENST00000364690 107 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU6-880P-201ENST00000384526 107 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 MIR1252-201ENST00000408861 65 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU6-121P-201ENST00000410525 99 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU6-277P-201ENST00000516272 106 ntBASIC-1.04□□□□□ -2.58
COL4A5P29400 RNU6-664P-201ENST00000362381 107 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 SNORD36A-201ENST00000362874 73 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 Y_RNA.389-201ENST00000383924 113 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 SNORA51.5-201ENST00000384126 131 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 RNU6-466P-201ENST00000391224 103 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 ELOCP20-201ENST00000422460 345 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 RNU7-164P-201ENST00000459221 62 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 MIR6502-201ENST00000617296 76 ntBASIC-1.05□□□□□ -2.58
COL4A5P29400 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 SNORD27-201ENST00000363981 72 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 Y_RNA.262-201ENST00000364641 102 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 SNORD18B-201ENST00000365659 72 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 RNU6-381P-201ENST00000391259 108 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 AC145423.2-201ENST00000610631 239 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 MIR376B-201ENST00000614515 100 ntBASIC-1.06□□□□□ -2.58
COL4A5P29400 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.07□□□□□ -2.58
COL4A5P29400 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.07□□□□□ -2.58
COL4A5P29400 MIR124-2-201ENST00000385081 109 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms