Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR3613-201ENST00000579844 87 ntBASIC1.02□□□□□ -2.25
VAMP1P23763 Y_RNA.221-201ENST00000364248 96 ntBASIC1.01□□□□□ -2.25
VAMP1P23763 RNU6-813P-201ENST00000384691 107 ntBASIC1.01□□□□□ -2.25
VAMP1P23763 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.01□□□□□ -2.25
VAMP1P23763 MIR4639-201ENST00000584938 69 ntBASIC1.01□□□□□ -2.25
VAMP1P23763 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
VAMP1P23763 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VAMP1P23763 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
VAMP1P23763 MIR181B2-201ENST00000385004 89 ntBASIC1□□□□□ -2.25
VAMP1P23763 AC004223.1-201ENST00000479840 271 ntBASIC1□□□□□ -2.25
VAMP1P23763 AC091304.10-201ENST00000641554 121 ntBASIC1□□□□□ -2.25
VAMP1P23763 RNU6-32P-201ENST00000383948 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-13P-201ENST00000384248 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-12P-201ENST00000384604 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-41P-201ENST00000384741 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 SNORA17.3-201ENST00000391159 129 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 AC244505.6-201ENST00000452829 130 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-109P-201ENST00000516364 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 RNU6-184P-201ENST00000516514 107 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 Y_RNA.705-201ENST00000516862 110 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 AC012531.4-201ENST00000616509 177 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.99□□□□□ -2.25
VAMP1P23763 AC092634.7-201ENST00000621022 103 ntBASIC0.99□□□□□ -2.25
VAMP1P23763 Y_RNA.467-201ENST00000384297 102 ntBASIC0.98□□□□□ -2.25
VAMP1P23763 SNORD13-201ENST00000459299 104 ntBASIC0.98□□□□□ -2.25
VAMP1P23763 Y_RNA.93-201ENST00000363066 109 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNU6-1244P-201ENST00000363614 108 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 SNORD18A-201ENST00000363753 72 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 MIR519A1-201ENST00000385257 85 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 SNORA40.6-201ENST00000391153 128 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNA5SP247-201ENST00000411181 105 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 SNORD71-201ENST00000411292 86 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 AC108667.1-201ENST00000428618 249 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNU7-104P-201ENST00000459398 79 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RNU7-106P-201ENST00000459514 67 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 TRMT112P2-201ENST00000512910 132 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 AL590095.2-201ENST00000604136 117 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 MIR2052-201ENST00000636055 55 ntBASIC0.97□□□□□ -2.25
VAMP1P23763 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.97□□□□□ -2.25
VAMP1P23763 Y_RNA.81-201ENST00000362997 102 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 SNORA7.1-201ENST00000363750 139 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-524P-201ENST00000384270 107 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-972P-201ENST00000391208 107 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-466P-201ENST00000391224 103 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNA5SP227-201ENST00000516184 113 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNA5SP94-201ENST00000516917 108 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 AC103810.7-201ENST00000607821 91 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 AC244669.1-204ENST00000621564 178 ntBASIC0.96□□□□□ -2.26
VAMP1P23763 RNU6-1260P-201ENST00000362944 107 ntBASIC0.95□□□□□ -2.26
VAMP1P23763 RNU6-537P-201ENST00000517277 103 ntBASIC0.95□□□□□ -2.26
VAMP1P23763 MIR4653-201ENST00000585107 83 ntBASIC0.95□□□□□ -2.26
VAMP1P23763 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VAMP1P23763 Y_RNA.4-201ENST00000362333 112 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 SNORA25.9-201ENST00000365087 128 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 RNU6-147P-201ENST00000383983 107 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 SNORD28-201ENST00000384706 75 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 MIR3660-201ENST00000584845 100 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
VAMP1P23763 MIR499A-201ENST00000384903 122 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 AP1B1P2-201ENST00000416196 106 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 AL606490.4-201ENST00000423117 127 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 SNORA40.13-201ENST00000516379 120 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 MIR4777-201ENST00000583710 86 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 AC067863.3-201ENST00000624172 122 ntBASIC0.93□□□□□ -2.26
VAMP1P23763 Y_RNA.495-201ENST00000384435 112 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 RNU6-887P-201ENST00000410660 100 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 RNU6-321P-201ENST00000410912 106 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 SCARNA16.5-201ENST00000517114 183 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 MIR548Z-201ENST00000584743 97 ntBASIC0.92□□□□□ -2.26
VAMP1P23763 MIR518E-201ENST00000385252 88 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 RNU7-61P-201ENST00000515897 61 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 RNU7-13P-201ENST00000516413 62 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 MIR6078-201ENST00000611069 100 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 AC025521.1-201ENST00000621624 286 ntBASIC0.91□□□□□ -2.26
VAMP1P23763 SNORD36A-201ENST00000362874 73 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 RNU6-644P-201ENST00000391155 98 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 RNA5SP268-201ENST00000516828 124 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 RNA5SP47-201ENST00000517230 109 ntBASIC0.9□□□□□ -2.27
VAMP1P23763 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
VAMP1P23763 Y_RNA.164-201ENST00000363709 102 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 RNU6-392P-201ENST00000364926 101 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 Y_RNA.327-201ENST00000365201 102 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 RNU6-716P-201ENST00000365621 103 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 RNA5SP121-201ENST00000516537 101 ntBASIC0.89□□□□□ -2.27
VAMP1P23763 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.89□□□□□ -2.27
VAMP1P23763 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
VAMP1P23763 Y_RNA.226-201ENST00000364337 114 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 AL513043.2-201ENST00000573941 143 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 MIR4421-201ENST00000578133 69 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 MIR4295-201ENST00000585286 85 ntBASIC0.88□□□□□ -2.27
VAMP1P23763 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
VAMP1P23763 RNU7-95P-201ENST00000459222 64 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 RNU6-65P-201ENST00000516332 98 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 Y_RNA.677-201ENST00000516401 85 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 MIR4303-201ENST00000581299 66 ntBASIC0.87□□□□□ -2.27
VAMP1P23763 RNU6-945P-201ENST00000383947 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 333.4 ms