Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC097635.1-201ENST00000450678 155 ntBASIC0.27□□□□□ -2.37
CDH3P22223 RNU7-107P-201ENST00000459121 61 ntBASIC0.27□□□□□ -2.37
CDH3P22223 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
CDH3P22223 Y_RNA.703-201ENST00000516846 111 ntBASIC0.27□□□□□ -2.37
CDH3P22223 RNU6-774P-201ENST00000363238 107 ntBASIC0.26□□□□□ -2.37
CDH3P22223 RNA5SP62-201ENST00000363457 110 ntBASIC0.26□□□□□ -2.37
CDH3P22223 RNU6-716P-201ENST00000365621 103 ntBASIC0.26□□□□□ -2.37
CDH3P22223 RNU6-571P-201ENST00000384128 107 ntBASIC0.26□□□□□ -2.37
CDH3P22223 RNU6-187P-201ENST00000384139 106 ntBASIC0.26□□□□□ -2.37
CDH3P22223 MIR599-201ENST00000385069 95 ntBASIC0.26□□□□□ -2.37
CDH3P22223 SNORA7.5-201ENST00000410672 110 ntBASIC0.26□□□□□ -2.37
CDH3P22223 MIR6755-201ENST00000619993 66 ntBASIC0.26□□□□□ -2.37
CDH3P22223 RNU6-363P-201ENST00000362895 105 ntBASIC0.25□□□□□ -2.37
CDH3P22223 RNY4P6-201ENST00000363667 96 ntBASIC0.25□□□□□ -2.37
CDH3P22223 RNA5SP325-201ENST00000363756 130 ntBASIC0.25□□□□□ -2.37
CDH3P22223 RNU6-726P-201ENST00000364680 107 ntBASIC0.25□□□□□ -2.37
CDH3P22223 RNU6-1062P-201ENST00000383908 107 ntBASIC0.25□□□□□ -2.37
CDH3P22223 MIR519A1-201ENST00000385257 85 ntBASIC0.25□□□□□ -2.37
CDH3P22223 RNA5SP63-201ENST00000391225 112 ntBASIC0.25□□□□□ -2.37
CDH3P22223 SNORD63B-201ENST00000411005 70 ntBASIC0.25□□□□□ -2.37
CDH3P22223 RNU6-1006P-201ENST00000516998 103 ntBASIC0.25□□□□□ -2.37
CDH3P22223 AL109933.3-201ENST00000619095 188 ntBASIC0.25□□□□□ -2.37
CDH3P22223 AL157777.2-201ENST00000258070 137 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNU6-1313P-201ENST00000362622 102 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNU6-170P-201ENST00000362832 104 ntBASIC0.24□□□□□ -2.37
CDH3P22223 Y_RNA.346-201ENST00000365385 112 ntBASIC0.24□□□□□ -2.37
CDH3P22223 SNORD50.2-201ENST00000365465 70 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNU6-815P-201ENST00000384080 113 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNU7-195P-201ENST00000458793 62 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNU7-104P-201ENST00000459398 79 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNU6-850P-201ENST00000516934 103 ntBASIC0.24□□□□□ -2.37
CDH3P22223 RNA5SP330-201ENST00000517096 96 ntBASIC0.24□□□□□ -2.37
CDH3P22223 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CDH3P22223 Y_RNA.218-201ENST00000364218 104 ntBASIC0.23□□□□□ -2.37
CDH3P22223 Y_RNA.221-201ENST00000364248 96 ntBASIC0.23□□□□□ -2.37
CDH3P22223 Y_RNA.362-201ENST00000365518 110 ntBASIC0.23□□□□□ -2.37
CDH3P22223 RNU1-29P-201ENST00000606574 126 ntBASIC0.23□□□□□ -2.37
CDH3P22223 RNU6-1099P-201ENST00000363533 107 ntBASIC0.22□□□□□ -2.37
CDH3P22223 RNU6-746P-201ENST00000384112 109 ntBASIC0.22□□□□□ -2.37
CDH3P22223 RNU6-80P-201ENST00000384195 107 ntBASIC0.22□□□□□ -2.37
CDH3P22223 SNORD38.2-201ENST00000384470 69 ntBASIC0.22□□□□□ -2.37
CDH3P22223 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
CDH3P22223 RNU7-106P-201ENST00000459514 67 ntBASIC0.22□□□□□ -2.37
CDH3P22223 AC069113.3-201ENST00000521019 150 ntBASIC0.22□□□□□ -2.37
CDH3P22223 MIR4752-201ENST00000579672 72 ntBASIC0.22□□□□□ -2.37
CDH3P22223 MIR4514-201ENST00000581410 57 ntBASIC0.22□□□□□ -2.37
CDH3P22223 AL512310.12-203ENST00000640543 90 ntBASIC0.22□□□□□ -2.37
CDH3P22223 Y_RNA.35-201ENST00000362601 101 ntBASIC0.21□□□□□ -2.38
CDH3P22223 RNA5SP257-201ENST00000363023 116 ntBASIC0.21□□□□□ -2.38
CDH3P22223 Y_RNA.247-201ENST00000364500 92 ntBASIC0.21□□□□□ -2.38
CDH3P22223 Y_RNA.342-201ENST00000365352 113 ntBASIC0.21□□□□□ -2.38
CDH3P22223 Y_RNA.423-201ENST00000384057 113 ntBASIC0.21□□□□□ -2.38
CDH3P22223 SNORD41.1-201ENST00000391000 69 ntBASIC0.21□□□□□ -2.38
CDH3P22223 Y_RNA.809-201ENST00000516058 95 ntBASIC0.21□□□□□ -2.38
CDH3P22223 RNU6-1018P-201ENST00000516577 106 ntBASIC0.21□□□□□ -2.38
CDH3P22223 Y_RNA.712-201ENST00000517011 92 ntBASIC0.21□□□□□ -2.38
CDH3P22223 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.21□□□□□ -2.38
CDH3P22223 AL162376.1-201ENST00000624117 175 ntBASIC0.21□□□□□ -2.38
CDH3P22223 AL162726.3-218ENST00000636401 95 ntBASIC0.21□□□□□ -2.38
CDH3P22223 MIR3914-2-201ENST00000637339 95 ntBASIC0.21□□□□□ -2.38
CDH3P22223 RNU6-1260P-201ENST00000362944 107 ntBASIC0.2□□□□□ -2.38
CDH3P22223 Y_RNA.155-201ENST00000363632 101 ntBASIC0.2□□□□□ -2.38
CDH3P22223 RNU6-704P-201ENST00000364162 103 ntBASIC0.2□□□□□ -2.38
CDH3P22223 RNU6-409P-201ENST00000384114 104 ntBASIC0.2□□□□□ -2.38
CDH3P22223 Y_RNA.507-201ENST00000384500 99 ntBASIC0.2□□□□□ -2.38
CDH3P22223 RNU6-816P-201ENST00000390914 107 ntBASIC0.2□□□□□ -2.38
CDH3P22223 RNU6-1268P-201ENST00000391214 107 ntBASIC0.2□□□□□ -2.38
CDH3P22223 RNU6-1239P-201ENST00000391310 107 ntBASIC0.2□□□□□ -2.38
CDH3P22223 MIR548L-201ENST00000408303 86 ntBASIC0.2□□□□□ -2.38
CDH3P22223 Y_RNA.681-201ENST00000516445 113 ntBASIC0.2□□□□□ -2.38
CDH3P22223 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.2□□□□□ -2.38
CDH3P22223 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
CDH3P22223 AL035470.1-201ENST00000622571 220 ntBASIC0.2□□□□□ -2.38
CDH3P22223 AC067863.3-201ENST00000624172 122 ntBASIC0.2□□□□□ -2.38
CDH3P22223 Y_RNA.71-201ENST00000362892 104 ntBASIC0.19□□□□□ -2.38
CDH3P22223 MIR516A2-201ENST00000384888 90 ntBASIC0.19□□□□□ -2.38
CDH3P22223 MIR516A1-201ENST00000385033 90 ntBASIC0.19□□□□□ -2.38
CDH3P22223 RNU6-659P-201ENST00000516454 104 ntBASIC0.19□□□□□ -2.38
CDH3P22223 MTND5P40-201ENST00000559945 246 ntBASIC0.19□□□□□ -2.38
CDH3P22223 MIR4768-201ENST00000585270 74 ntBASIC0.19□□□□□ -2.38
CDH3P22223 SNORD38.1-201ENST00000363863 68 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RNU6-1201P-201ENST00000384227 107 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RNA5SP299-201ENST00000391203 116 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RPL39P34-201ENST00000477141 156 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RNU6-848P-201ENST00000515948 107 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RNU6-617P-201ENST00000516147 107 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RNU6-473P-201ENST00000516164 107 ntBASIC0.18□□□□□ -2.38
CDH3P22223 SNORD33.1-201ENST00000516213 88 ntBASIC0.18□□□□□ -2.38
CDH3P22223 RNU6-1049P-201ENST00000516414 107 ntBASIC0.18□□□□□ -2.38
CDH3P22223 MIR4679-2-201ENST00000578358 77 ntBASIC0.18□□□□□ -2.38
CDH3P22223 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.18□□□□□ -2.38
CDH3P22223 RNU6-524P-201ENST00000384270 107 ntBASIC0.17□□□□□ -2.38
CDH3P22223 MIR548G-201ENST00000408442 89 ntBASIC0.17□□□□□ -2.38
CDH3P22223 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
CDH3P22223 MIR1912-201ENST00000410389 80 ntBASIC0.17□□□□□ -2.38
CDH3P22223 RNU6-1265P-201ENST00000516342 103 ntBASIC0.17□□□□□ -2.38
CDH3P22223 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.17□□□□□ -2.38
CDH3P22223 MIR4315-1-201ENST00000636800 73 ntBASIC0.17□□□□□ -2.38
CDH3P22223 MIR4315-2-201ENST00000640925 73 ntBASIC0.17□□□□□ -2.38
CDH3P22223 SNORA9.1-201ENST00000362412 131 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 253.6 ms