Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.71□□□□□ -2.3
PEPDP12955 AL606490.4-201ENST00000423117 127 ntBASIC0.71□□□□□ -2.3
PEPDP12955 AL353813.1-201ENST00000440700 253 ntBASIC0.71□□□□□ -2.3
PEPDP12955 SNRPGP12-201ENST00000449481 213 ntBASIC0.71□□□□□ -2.3
PEPDP12955 AC244505.6-201ENST00000452829 130 ntBASIC0.71□□□□□ -2.3
PEPDP12955 RNU6-412P-201ENST00000516434 106 ntBASIC0.71□□□□□ -2.3
PEPDP12955 Y_RNA.697-201ENST00000516776 113 ntBASIC0.71□□□□□ -2.3
PEPDP12955 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
PEPDP12955 SNORD38.1-201ENST00000363863 68 ntBASIC0.7□□□□□ -2.3
PEPDP12955 Y_RNA.261-201ENST00000364631 102 ntBASIC0.7□□□□□ -2.3
PEPDP12955 Y_RNA.323-201ENST00000365157 109 ntBASIC0.7□□□□□ -2.3
PEPDP12955 SNORA72.6-201ENST00000384520 129 ntBASIC0.7□□□□□ -2.3
PEPDP12955 RNU6-679P-201ENST00000391003 106 ntBASIC0.7□□□□□ -2.3
PEPDP12955 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
PEPDP12955 SNORA62.5-201ENST00000516634 120 ntBASIC0.7□□□□□ -2.3
PEPDP12955 Y_RNA.273-201ENST00000364703 102 ntBASIC0.69□□□□□ -2.3
PEPDP12955 MIR34C-201ENST00000384831 77 ntBASIC0.69□□□□□ -2.3
PEPDP12955 RNU6-816P-201ENST00000390914 107 ntBASIC0.69□□□□□ -2.3
PEPDP12955 RNU6-1268P-201ENST00000391214 107 ntBASIC0.69□□□□□ -2.3
PEPDP12955 RNU6-1239P-201ENST00000391310 107 ntBASIC0.69□□□□□ -2.3
PEPDP12955 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.69□□□□□ -2.3
PEPDP12955 DEFB131E-201ENST00000532329 154 ntBASIC0.69□□□□□ -2.3
PEPDP12955 AC138869.1-201ENST00000568623 124 ntBASIC0.69□□□□□ -2.3
PEPDP12955 MIR4694-201ENST00000578534 80 ntBASIC0.69□□□□□ -2.3
PEPDP12955 MIR101-2-201ENST00000362195 79 ntBASIC0.68□□□□□ -2.3
PEPDP12955 RNY4P3-201ENST00000365254 95 ntBASIC0.68□□□□□ -2.3
PEPDP12955 RNU6-1081P-201ENST00000384537 107 ntBASIC0.68□□□□□ -2.3
PEPDP12955 RNU6-535P-201ENST00000384722 107 ntBASIC0.68□□□□□ -2.3
PEPDP12955 RNU6-476P-201ENST00000384726 107 ntBASIC0.68□□□□□ -2.3
PEPDP12955 RNU6-1154P-201ENST00000391001 104 ntBASIC0.68□□□□□ -2.3
PEPDP12955 RNU6-1064P-201ENST00000410626 104 ntBASIC0.68□□□□□ -2.3
PEPDP12955 AC068339.1-201ENST00000526965 141 ntBASIC0.68□□□□□ -2.3
PEPDP12955 AC018659.1-201ENST00000551083 169 ntBASIC0.68□□□□□ -2.3
PEPDP12955 MIR4639-201ENST00000584938 69 ntBASIC0.68□□□□□ -2.3
PEPDP12955 MIR6835-201ENST00000621552 64 ntBASIC0.68□□□□□ -2.3
PEPDP12955 AL035470.1-201ENST00000622571 220 ntBASIC0.68□□□□□ -2.3
PEPDP12955 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
PEPDP12955 SNORA9.1-201ENST00000362412 131 ntBASIC0.67□□□□□ -2.3
PEPDP12955 RNU6-1201P-201ENST00000384227 107 ntBASIC0.67□□□□□ -2.3
PEPDP12955 SNORD116-21-201ENST00000384507 92 ntBASIC0.67□□□□□ -2.3
PEPDP12955 MIR140-201ENST00000385282 100 ntBASIC0.67□□□□□ -2.3
PEPDP12955 RN7SKP12-201ENST00000516275 143 ntBASIC0.67□□□□□ -2.3
PEPDP12955 SNORA31.14-201ENST00000516728 116 ntBASIC0.67□□□□□ -2.3
PEPDP12955 MTND5P34-201ENST00000568888 325 ntBASIC0.67□□□□□ -2.3
PEPDP12955 MIR5009-201ENST00000578736 100 ntBASIC0.67□□□□□ -2.3
PEPDP12955 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
PEPDP12955 MIR6828-201ENST00000636181 60 ntBASIC0.67□□□□□ -2.3
PEPDP12955 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.67□□□□□ -2.3
PEPDP12955 Y_RNA.32-201ENST00000362589 110 ntBASIC0.66□□□□□ -2.3
PEPDP12955 MIR3678-201ENST00000578455 94 ntBASIC0.66□□□□□ -2.3
PEPDP12955 AL442128.1-201ENST00000615151 90 ntBASIC0.66□□□□□ -2.3
PEPDP12955 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.3
PEPDP12955 RNA5SP347-201ENST00000362445 119 ntBASIC0.65□□□□□ -2.31
PEPDP12955 Y_RNA.78-201ENST00000362970 110 ntBASIC0.65□□□□□ -2.31
PEPDP12955 Y_RNA.155-201ENST00000363632 101 ntBASIC0.65□□□□□ -2.31
PEPDP12955 RNU6-1056P-201ENST00000383996 107 ntBASIC0.65□□□□□ -2.31
PEPDP12955 MIR635-201ENST00000384830 98 ntBASIC0.65□□□□□ -2.31
PEPDP12955 MIR548A1-201ENST00000385041 97 ntBASIC0.65□□□□□ -2.31
PEPDP12955 Y_RNA.629-201ENST00000411368 105 ntBASIC0.65□□□□□ -2.31
PEPDP12955 RNU6-469P-201ENST00000516253 101 ntBASIC0.65□□□□□ -2.31
PEPDP12955 MIR4500-201ENST00000579472 76 ntBASIC0.65□□□□□ -2.31
PEPDP12955 MIR4439-201ENST00000583746 80 ntBASIC0.65□□□□□ -2.31
PEPDP12955 RNU6-170P-201ENST00000362832 104 ntBASIC0.64□□□□□ -2.31
PEPDP12955 RNY3P2-201ENST00000362918 102 ntBASIC0.64□□□□□ -2.31
PEPDP12955 SNORD18A-201ENST00000363753 72 ntBASIC0.64□□□□□ -2.31
PEPDP12955 Y_RNA.173-201ENST00000363776 113 ntBASIC0.64□□□□□ -2.31
PEPDP12955 U8.6-201ENST00000364939 135 ntBASIC0.64□□□□□ -2.31
PEPDP12955 RNA5SP331-201ENST00000364986 107 ntBASIC0.64□□□□□ -2.31
PEPDP12955 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
PEPDP12955 SNORA7.5-201ENST00000410672 110 ntBASIC0.64□□□□□ -2.31
PEPDP12955 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
PEPDP12955 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.64□□□□□ -2.31
PEPDP12955 AL606753.1-201ENST00000427435 87 ntBASIC0.64□□□□□ -2.31
PEPDP12955 AC092628.1-201ENST00000436250 252 ntBASIC0.64□□□□□ -2.31
PEPDP12955 AC097635.1-201ENST00000450678 155 ntBASIC0.64□□□□□ -2.31
PEPDP12955 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
PEPDP12955 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.64□□□□□ -2.31
PEPDP12955 AL512310.12-203ENST00000640543 90 ntBASIC0.64□□□□□ -2.31
PEPDP12955 RNA5SP47-201ENST00000517230 109 ntBASIC0.63□□□□□ -2.31
PEPDP12955 Y_RNA.35-201ENST00000362601 101 ntBASIC0.62□□□□□ -2.31
PEPDP12955 Y_RNA.342-201ENST00000365352 113 ntBASIC0.62□□□□□ -2.31
PEPDP12955 SNORD28-201ENST00000384706 75 ntBASIC0.62□□□□□ -2.31
PEPDP12955 RNU6-589P-201ENST00000516485 107 ntBASIC0.62□□□□□ -2.31
PEPDP12955 RNA5SP94-201ENST00000516917 108 ntBASIC0.62□□□□□ -2.31
PEPDP12955 RNU6-90P-201ENST00000606352 106 ntBASIC0.62□□□□□ -2.31
PEPDP12955 AC243829.3-201ENST00000622177 108 ntBASIC0.62□□□□□ -2.31
PEPDP12955 Y_RNA.10-201ENST00000362371 110 ntBASIC0.61□□□□□ -2.31
PEPDP12955 RNU6-1260P-201ENST00000362944 107 ntBASIC0.61□□□□□ -2.31
PEPDP12955 RNU6-1099P-201ENST00000363533 107 ntBASIC0.61□□□□□ -2.31
PEPDP12955 MIR577-201ENST00000385196 96 ntBASIC0.61□□□□□ -2.31
PEPDP12955 MIR548G-201ENST00000408442 89 ntBASIC0.61□□□□□ -2.31
PEPDP12955 SCARNA16.5-201ENST00000517114 183 ntBASIC0.61□□□□□ -2.31
PEPDP12955 MIR4711-201ENST00000578274 70 ntBASIC0.61□□□□□ -2.31
PEPDP12955 RNU6-832P-201ENST00000363319 107 ntBASIC0.6□□□□□ -2.31
PEPDP12955 SNORA63.5-201ENST00000363548 123 ntBASIC0.6□□□□□ -2.31
PEPDP12955 RNU6-1107P-201ENST00000364817 104 ntBASIC0.6□□□□□ -2.31
PEPDP12955 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.6□□□□□ -2.31
PEPDP12955 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.6□□□□□ -2.31
PEPDP12955 RNU6-863P-201ENST00000515989 104 ntBASIC0.6□□□□□ -2.31
PEPDP12955 RNU6-850P-201ENST00000516934 103 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 307 ms