Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 RNU6-1239P-201ENST00000391310 107 ntBASIC-2□□□□□ -2.73
APOBP04114 Y_RNA.608-201ENST00000410647 95 ntBASIC-2□□□□□ -2.73
APOBP04114 RNU6-518P-201ENST00000516056 96 ntBASIC-2□□□□□ -2.73
APOBP04114 MIR5692C1-201ENST00000585309 91 ntBASIC-2□□□□□ -2.73
APOBP04114 RNU6-665P-201ENST00000384639 107 ntBASIC-2□□□□□ -2.73
APOBP04114 AL512360.1-201ENST00000555346 234 ntBASIC-2□□□□□ -2.73
APOBP04114 MIR5696-201ENST00000578474 85 ntBASIC-2□□□□□ -2.73
APOBP04114 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-2□□□□□ -2.73
APOBP04114 AC097639.2-201ENST00000603159 172 ntBASIC-2□□□□□ -2.73
APOBP04114 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.01□□□□□ -2.73
APOBP04114 MIR548G-201ENST00000408442 89 ntBASIC-2.01□□□□□ -2.73
APOBP04114 MIR6509-201ENST00000614603 85 ntBASIC-2.01□□□□□ -2.73
APOBP04114 MIR1-2-201ENST00000384961 85 ntBASIC-2.01□□□□□ -2.73
APOBP04114 Y_RNA.691-201ENST00000516611 103 ntBASIC-2.01□□□□□ -2.73
APOBP04114 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.01□□□□□ -2.73
APOBP04114 SNORA63.2-201ENST00000362603 126 ntBASIC-2.01□□□□□ -2.73
APOBP04114 RNU6-809P-201ENST00000384461 107 ntBASIC-2.01□□□□□ -2.73
APOBP04114 Y_RNA.541-201ENST00000384640 113 ntBASIC-2.01□□□□□ -2.73
APOBP04114 AL118496.2-201ENST00000448300 230 ntBASIC-2.01□□□□□ -2.73
APOBP04114 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.01□□□□□ -2.73
APOBP04114 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC-2.01□□□□□ -2.73
APOBP04114 AC024933.1-201ENST00000608472 348 ntBASIC-2.01□□□□□ -2.73
APOBP04114 RNU6-595P-201ENST00000363944 107 ntBASIC-2.01□□□□□ -2.73
APOBP04114 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.01□□□□□ -2.73
APOBP04114 AC098826.2-201ENST00000452011 651 ntBASIC-2.01□□□□□ -2.73
APOBP04114 snoU13.17-201ENST00000458802 104 ntBASIC-2.02□□□□□ -2.73
APOBP04114 RNU6-1262P-201ENST00000516217 96 ntBASIC-2.02□□□□□ -2.73
APOBP04114 AC020661.2-201ENST00000560114 134 ntBASIC-2.02□□□□□ -2.73
APOBP04114 RNU6-626P-201ENST00000363354 107 ntBASIC-2.02□□□□□ -2.73
APOBP04114 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-2.02□□□□□ -2.73
APOBP04114 Y_RNA.405-201ENST00000383979 100 ntBASIC-2.02□□□□□ -2.73
APOBP04114 Y_RNA.451-201ENST00000384200 100 ntBASIC-2.02□□□□□ -2.73
APOBP04114 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.02□□□□□ -2.73
APOBP04114 Y_RNA.524-201ENST00000384564 100 ntBASIC-2.02□□□□□ -2.73
APOBP04114 Y_RNA.561-201ENST00000384694 100 ntBASIC-2.02□□□□□ -2.73
APOBP04114 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-2.02□□□□□ -2.73
APOBP04114 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-2.02□□□□□ -2.73
APOBP04114 MIR8084-201ENST00000614105 89 ntBASIC-2.02□□□□□ -2.73
APOBP04114 U2.18-201ENST00000622185 84 ntBASIC-2.02□□□□□ -2.73
APOBP04114 MIR363-201ENST00000384840 75 ntBASIC-2.03□□□□□ -2.73
APOBP04114 MIR517A-201ENST00000385001 87 ntBASIC-2.03□□□□□ -2.73
APOBP04114 MIR4273-201ENST00000582824 84 ntBASIC-2.03□□□□□ -2.73
APOBP04114 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-2.03□□□□□ -2.73
APOBP04114 RNU7-2P-201ENST00000516096 62 ntBASIC-2.03□□□□□ -2.73
APOBP04114 RNU6-247P-201ENST00000362636 107 ntBASIC-2.03□□□□□ -2.73
APOBP04114 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.03□□□□□ -2.73
APOBP04114 AC016550.1-201ENST00000505348 785 ntBASIC-2.03□□□□□ -2.73
APOBP04114 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.03□□□□□ -2.73
APOBP04114 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.03□□□□□ -2.73
APOBP04114 AP002392.1-201ENST00000537692 208 ntBASIC-2.03□□□□□ -2.73
APOBP04114 MIR3942-201ENST00000585264 109 ntBASIC-2.03□□□□□ -2.73
APOBP04114 AC021443.1-201ENST00000604478 211 ntBASIC-2.03□□□□□ -2.73
APOBP04114 RNU6-361P-201ENST00000364454 107 ntBASIC-2.03□□□□□ -2.74
APOBP04114 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.03□□□□□ -2.74
APOBP04114 Y_RNA.77-201ENST00000362962 107 ntBASIC-2.04□□□□□ -2.74
APOBP04114 Y_RNA.101-201ENST00000363154 102 ntBASIC-2.04□□□□□ -2.74
APOBP04114 RNU6-781P-201ENST00000516377 101 ntBASIC-2.04□□□□□ -2.74
APOBP04114 MIR6739-201ENST00000622461 75 ntBASIC-2.04□□□□□ -2.74
APOBP04114 RNU6-1301P-201ENST00000362724 104 ntBASIC-2.04□□□□□ -2.74
APOBP04114 Vault.3-201ENST00000516676 95 ntBASIC-2.04□□□□□ -2.74
APOBP04114 AC060780.3-201ENST00000589464 80 ntBASIC-2.04□□□□□ -2.74
APOBP04114 RNU6-501P-201ENST00000364072 100 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-310P-201ENST00000384655 107 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-189P-201ENST00000516120 101 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU2-4P-201ENST00000606190 192 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-340P-201ENST00000364005 107 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-651P-201ENST00000411040 105 ntBASIC-2.05□□□□□ -2.74
APOBP04114 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.05□□□□□ -2.74
APOBP04114 AC006006.1-201ENST00000603082 144 ntBASIC-2.05□□□□□ -2.74
APOBP04114 AC022079.1-201ENST00000621546 602 ntBASIC-2.05□□□□□ -2.74
APOBP04114 MIR429-201ENST00000362106 83 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-413P-201ENST00000384115 107 ntBASIC-2.05□□□□□ -2.74
APOBP04114 AC083798.1-201ENST00000472671 131 ntBASIC-2.05□□□□□ -2.74
APOBP04114 AC007485.1-201ENST00000616755 206 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-309P-201ENST00000364573 106 ntBASIC-2.05□□□□□ -2.74
APOBP04114 Y_RNA.389-201ENST00000383924 113 ntBASIC-2.05□□□□□ -2.74
APOBP04114 MIR548A1-201ENST00000385041 97 ntBASIC-2.05□□□□□ -2.74
APOBP04114 MIR624-201ENST00000385217 97 ntBASIC-2.05□□□□□ -2.74
APOBP04114 MIR4703-201ENST00000577728 79 ntBASIC-2.05□□□□□ -2.74
APOBP04114 RNU6-990P-201ENST00000364385 104 ntBASIC-2.06□□□□□ -2.74
APOBP04114 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.06□□□□□ -2.74
APOBP04114 RNU6-468P-201ENST00000384003 109 ntBASIC-2.06□□□□□ -2.74
APOBP04114 Z84480.1-201ENST00000605131 311 ntBASIC-2.06□□□□□ -2.74
APOBP04114 AL365265.1-201ENST00000621045 234 ntBASIC-2.06□□□□□ -2.74
APOBP04114 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.06□□□□□ -2.74
APOBP04114 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.06□□□□□ -2.74
APOBP04114 RNU6-1205P-201ENST00000363625 106 ntBASIC-2.06□□□□□ -2.74
APOBP04114 AL606534.2-204ENST00000635008 178 ntBASIC-2.06□□□□□ -2.74
APOBP04114 FGF7P7-201ENST00000514120 227 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU6-62P-201ENST00000516526 102 ntBASIC-2.07□□□□□ -2.74
APOBP04114 Y_RNA.106-201ENST00000363189 100 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU7-180P-201ENST00000459240 63 ntBASIC-2.07□□□□□ -2.74
APOBP04114 SNORD77.4-201ENST00000516158 81 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNA5SP153-201ENST00000516498 76 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU6-668P-201ENST00000364180 107 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU6-669P-201ENST00000365575 107 ntBASIC-2.07□□□□□ -2.74
APOBP04114 RNU6-1213P-201ENST00000517075 94 ntBASIC-2.07□□□□□ -2.74
APOBP04114 MIR4536-1-201ENST00000583537 88 ntBASIC-2.07□□□□□ -2.74
APOBP04114 AC092794.2-201ENST00000620933 563 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms