Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RNU6-358P-201ENST00000516564 75 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 AP002795.1-201ENST00000534879 84 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 AL138825.1-201ENST00000618587 192 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 AC078883.4-201ENST00000623218 367 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 RNU6-310P-201ENST00000384655 107 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 RNU6-695P-201ENST00000391157 104 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 RNU4-88P-201ENST00000411220 86 ntBASIC-1.93□□□□□ -2.72
PCF11O94913 ELOCP20-201ENST00000422460 345 ntBASIC-1.94□□□□□ -2.72
PCF11O94913 MIR548AM-201ENST00000584298 74 ntBASIC-1.94□□□□□ -2.72
PCF11O94913 AP001362.1-201ENST00000625165 124 ntBASIC-1.94□□□□□ -2.72
PCF11O94913 RNU6-80P-201ENST00000384195 107 ntBASIC-1.95□□□□□ -2.72
PCF11O94913 AC025253.1-201ENST00000613623 543 ntBASIC-1.95□□□□□ -2.72
PCF11O94913 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.96□□□□□ -2.72
PCF11O94913 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.96□□□□□ -2.72
PCF11O94913 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.96□□□□□ -2.72
PCF11O94913 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.96□□□□□ -2.72
PCF11O94913 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.96□□□□□ -2.72
PCF11O94913 SCARNA15-202ENST00000516881 127 ntBASIC-1.96□□□□□ -2.72
PCF11O94913 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.96□□□□□ -2.72
PCF11O94913 SNORD114-4-201ENST00000363962 75 ntBASIC-1.97□□□□□ -2.72
PCF11O94913 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.97□□□□□ -2.72
PCF11O94913 SNORA51.5-201ENST00000384126 131 ntBASIC-1.97□□□□□ -2.72
PCF11O94913 RNU6-415P-201ENST00000516252 97 ntBASIC-1.97□□□□□ -2.72
PCF11O94913 RNU4-90P-201ENST00000362773 141 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 RNU6-728P-201ENST00000365375 104 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.98□□□□□ -2.73
PCF11O94913 AL353691.2-201ENST00000443795 59 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 MIR548AE2-201ENST00000583456 67 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 RNU6-890P-201ENST00000384121 107 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 MT-TT-201ENST00000387460 66 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 SNORA40.14-201ENST00000516543 86 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 MIR4490-201ENST00000582647 84 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 snoU18.1-201ENST00000629629 71 ntBASIC-1.98□□□□□ -2.73
PCF11O94913 SNORD113-8-201ENST00000363497 74 ntBASIC-1.99□□□□□ -2.73
PCF11O94913 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.99□□□□□ -2.73
PCF11O94913 RPL35AP4-201ENST00000412007 102 ntBASIC-1.99□□□□□ -2.73
PCF11O94913 FGF7P4-201ENST00000509595 295 ntBASIC-1.99□□□□□ -2.73
PCF11O94913 AC108081.1-201ENST00000604358 221 ntBASIC-1.99□□□□□ -2.73
PCF11O94913 Y_RNA.127-201ENST00000363386 109 ntBASIC-2□□□□□ -2.73
PCF11O94913 Y_RNA.635-201ENST00000459041 101 ntBASIC-2□□□□□ -2.73
PCF11O94913 Y_RNA.698-201ENST00000516798 118 ntBASIC-2□□□□□ -2.73
PCF11O94913 RNU6-699P-201ENST00000517081 110 ntBASIC-2□□□□□ -2.73
PCF11O94913 RNU6-841P-201ENST00000383872 107 ntBASIC-2.01□□□□□ -2.73
PCF11O94913 MIR4272-201ENST00000635924 64 ntBASIC-2.01□□□□□ -2.73
PCF11O94913 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 Y_RNA.448-201ENST00000384185 108 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 MIR206-201ENST00000384872 86 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 SNORD19-201ENST00000391191 68 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 MTATP6P19-201ENST00000413797 659 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 Y_RNA.239-201ENST00000364444 113 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 Y_RNA.357-201ENST00000365487 109 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 RNU6-102P-201ENST00000384485 104 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-2.02□□□□□ -2.73
PCF11O94913 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.02□□□□□ -2.73
PCF11O94913 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 Y_RNA.353-201ENST00000365440 108 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 MIR516A2-201ENST00000384888 90 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 MIR516A1-201ENST00000385033 90 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.03□□□□□ -2.73
PCF11O94913 SNORD116-25-201ENST00000516517 92 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 RNU6-1149P-201ENST00000516810 97 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 MIR4748-201ENST00000578076 82 ntBASIC-2.03□□□□□ -2.73
PCF11O94913 RNU4-69P-201ENST00000410677 143 ntBASIC-2.04□□□□□ -2.74
PCF11O94913 RNU7-30P-201ENST00000516835 62 ntBASIC-2.04□□□□□ -2.74
PCF11O94913 SNORD116.3-201ENST00000517176 78 ntBASIC-2.04□□□□□ -2.74
PCF11O94913 MIR3974-201ENST00000637126 96 ntBASIC-2.04□□□□□ -2.74
PCF11O94913 Y_RNA.76-201ENST00000362931 109 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 Y_RNA.207-201ENST00000364142 106 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 MIR624-201ENST00000385217 97 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 AC090617.8-201ENST00000623339 167 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 MIR5683-201ENST00000636514 76 ntBASIC-2.05□□□□□ -2.74
PCF11O94913 MIR616-201ENST00000385293 97 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 RNU2-16P-201ENST00000410712 136 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 RNU4-14P-201ENST00000410858 122 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 RNU6-850P-201ENST00000516934 103 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 RNU6-1057P-201ENST00000517162 102 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2.06□□□□□ -2.74
PCF11O94913 MIR3123-201ENST00000583417 75 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 AC037487.3-201ENST00000606668 112 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 AC084781.2-201ENST00000615568 161 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 MIR548O2-201ENST00000616090 70 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 AC022079.1-201ENST00000621546 602 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 HSPE1P25-201ENST00000455484 251 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 AC082651.2-201ENST00000496833 166 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 SNORA20.3-201ENST00000516880 132 ntBASIC-2.06□□□□□ -2.74
PCF11O94913 RNU6-762P-201ENST00000517107 102 ntBASIC-2.06□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 3036.8 ms