Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 MIR1255B1-201ENST00000636325 63 ntBASIC0.06□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.580-201ENST00000391004 95 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 RNU7-195P-201ENST00000458793 62 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 RNU6-781P-201ENST00000516377 101 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 RNU6-521P-201ENST00000516663 105 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 RNU6-182P-201ENST00000516970 105 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 AP001328.1-201ENST00000528550 176 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 MIR5589-201ENST00000579442 60 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 MIR548X2-201ENST00000579776 100 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.05□□□□□ -2.4
NKX2-6A6NCS4 SNORD114-5-201ENST00000362928 70 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 RNA5SP403-201ENST00000363598 108 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 Y_RNA.270-201ENST00000364693 104 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 SNORA2A-201ENST00000383885 135 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 MIR569-201ENST00000385228 96 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 RNU6-269P-201ENST00000391077 97 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 SNORD63B-201ENST00000411005 70 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 RNU7-106P-201ENST00000459514 67 ntBASIC0.04□□□□□ -2.4
NKX2-6A6NCS4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.03□□□□□ -2.4
NKX2-6A6NCS4 RNA5SP128-201ENST00000365305 116 ntBASIC0.03□□□□□ -2.4
NKX2-6A6NCS4 RNU6-886P-201ENST00000384319 105 ntBASIC0.03□□□□□ -2.4
NKX2-6A6NCS4 SNORA7.5-201ENST00000410672 110 ntBASIC0.03□□□□□ -2.4
NKX2-6A6NCS4 FTX_2.1-201ENST00000618816 94 ntBASIC0.03□□□□□ -2.4
NKX2-6A6NCS4 MIR371B-201ENST00000638082 66 ntBASIC0.03□□□□□ -2.4
NKX2-6A6NCS4 RNU6-235P-201ENST00000362644 107 ntBASIC0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.360-201ENST00000365512 102 ntBASIC0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.400-201ENST00000383963 111 ntBASIC0.02□□□□□ -2.41
NKX2-6A6NCS4 MIR593-201ENST00000384856 100 ntBASIC0.02□□□□□ -2.41
NKX2-6A6NCS4 MIR4667-201ENST00000578933 66 ntBASIC0.02□□□□□ -2.41
NKX2-6A6NCS4 AL162376.1-201ENST00000624117 175 ntBASIC0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 RNU6-426P-201ENST00000516464 97 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 RNU6-1234P-201ENST00000516877 103 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 RNU6-850P-201ENST00000516934 103 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 MIR3163-201ENST00000581592 73 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 MIR4802-201ENST00000581881 80 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 RNU7-10P-201ENST00000607194 63 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 AP001340.1-201ENST00000624405 217 ntBASIC0.01□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.198-201ENST00000364013 98 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.362-201ENST00000365518 110 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 RNU6-524P-201ENST00000384270 107 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.528-201ENST00000384575 108 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 MIR516A2-201ENST00000384888 90 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 MIR516A1-201ENST00000385033 90 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 MIR501-201ENST00000390204 84 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 MIR548I2-201ENST00000408348 149 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 AL158147.1-201ENST00000443970 75 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 AC097635.1-201ENST00000450678 155 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 MIR4290-201ENST00000583807 95 ntBASIC0□□□□□ -2.41
NKX2-6A6NCS4 RNU6-170P-201ENST00000362832 104 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 RNU6-647P-201ENST00000364243 107 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 SNORD41.1-201ENST00000391000 69 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 MIR548H2-201ENST00000408874 88 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 MIR4743-201ENST00000584576 69 ntBASIC-0.01□□□□□ -2.41
NKX2-6A6NCS4 SNORD115-19-201ENST00000363098 82 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 SNORD115-18-201ENST00000363293 82 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 SNORD115-17-201ENST00000364612 82 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 MIR145-201ENST00000384967 88 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 Z95118.1-201ENST00000421372 247 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 RNA5SP484-201ENST00000458857 111 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 RNU6-346P-201ENST00000516288 111 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 IGLVI-20-201ENST00000519296 130 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 AC141557.1-201ENST00000540982 400 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 MTND5P40-201ENST00000559945 246 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 NAMPTP3-201ENST00000569273 224 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 MIR3920-201ENST00000581751 86 ntBASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.02□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 MIR610-201ENST00000385139 96 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 MIR759-201ENST00000390224 91 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 AL161932.1-201ENST00000437408 146 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 U7.2-201ENST00000607576 63 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 AL512310.12-203ENST00000640543 90 ntBASIC-0.03□□□□□ -2.41
NKX2-6A6NCS4 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 RNU6-571P-201ENST00000384128 107 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 MIR548D2-201ENST00000384955 97 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 RNA5SP25-201ENST00000410815 110 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 MTND4LP9-201ENST00000427694 174 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 AL353813.1-201ENST00000440700 253 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 SPINT5P-201ENST00000448174 155 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 MIR5706-201ENST00000579841 80 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 uc_338.28-201ENST00000612082 187 ntBASIC-0.04□□□□□ -2.42
NKX2-6A6NCS4 RNU6-161P-201ENST00000363051 106 ntBASIC-0.05□□□□□ -2.42
NKX2-6A6NCS4 SNORD110-201ENST00000408189 75 ntBASIC-0.05□□□□□ -2.42
NKX2-6A6NCS4 RNA5SP136-201ENST00000410906 107 ntBASIC-0.05□□□□□ -2.42
NKX2-6A6NCS4 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms