Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 SNORD12-201ENST00000391002 90 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 SNORA75.2-201ENST00000391138 150 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 SNORA75.3-201ENST00000391231 150 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 AC093729.1-201ENST00000513074 128 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 MTND5P40-201ENST00000559945 246 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 AC133485.1-201ENST00000567176 124 ntBASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CCDC187A0A096LP49 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 RNU6-1229P-201ENST00000364295 107 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 RNU6-776P-201ENST00000364403 104 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 RNU6-1022P-201ENST00000365049 104 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 SNORA40.6-201ENST00000391153 128 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 RNU7-21P-201ENST00000459430 62 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 AC004223.1-201ENST00000479840 271 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 RNU7-153P-201ENST00000516455 62 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 RNU6-850P-201ENST00000516934 103 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 MIR4264-201ENST00000583520 66 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 AP000753.3-201ENST00000604083 169 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 MIR6734-201ENST00000621166 68 ntBASIC1.25□□□□□ -2.21
CCDC187A0A096LP49 MIR377-201ENST00000362145 69 ntBASIC1.24□□□□□ -2.21
CCDC187A0A096LP49 RNU6-478P-201ENST00000363904 110 ntBASIC1.24□□□□□ -2.21
CCDC187A0A096LP49 RNU6-580P-201ENST00000365159 107 ntBASIC1.24□□□□□ -2.21
CCDC187A0A096LP49 RNU6-571P-201ENST00000384128 107 ntBASIC1.24□□□□□ -2.21
CCDC187A0A096LP49 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
CCDC187A0A096LP49 RNU6-624P-201ENST00000363411 107 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.330-201ENST00000365230 109 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 RNU6-1165P-201ENST00000410119 107 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 RNU6-519P-201ENST00000410590 108 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 RNU7-90P-201ENST00000459216 62 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.648-201ENST00000459455 110 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 SNORA25.13-201ENST00000516395 103 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 RNA5SP61-201ENST00000516453 100 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 RMST_2.1-201ENST00000617263 136 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 MIR8066-201ENST00000617280 78 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 U6.109-201ENST00000636749 87 ntBASIC1.23□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.57-201ENST00000362806 113 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 SNORD36A-201ENST00000362874 73 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 RNU6-654P-201ENST00000364373 107 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 Y_RNA.588-201ENST00000391254 102 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 BX276092.1-201ENST00000427368 251 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 RNU6-75P-201ENST00000515944 104 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 MIR4500-201ENST00000579472 76 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 MIR4662A-201ENST00000637499 67 ntBASIC1.22□□□□□ -2.21
CCDC187A0A096LP49 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 RNU6-315P-201ENST00000362666 107 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 MT-TF-201ENST00000387314 71 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 RNU6-205P-201ENST00000390858 107 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 RNU7-62P-201ENST00000458856 62 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 RNU7-40P-201ENST00000516397 64 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 AC027335.2-201ENST00000624030 375 ntBASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
CCDC187A0A096LP49 MIR1236-201ENST00000408340 102 ntBASIC1.2□□□□□ -2.22
CCDC187A0A096LP49 snoU13.11-201ENST00000459219 104 ntBASIC1.2□□□□□ -2.22
CCDC187A0A096LP49 AC139453.2-201ENST00000487255 133 ntBASIC1.2□□□□□ -2.22
CCDC187A0A096LP49 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
CCDC187A0A096LP49 SNORD113.3-201ENST00000364630 78 ntBASIC1.19□□□□□ -2.22
CCDC187A0A096LP49 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
CCDC187A0A096LP49 AL450471.1-201ENST00000447509 127 ntBASIC1.19□□□□□ -2.22
CCDC187A0A096LP49 RNU6-523P-201ENST00000516304 54 ntBASIC1.19□□□□□ -2.22
CCDC187A0A096LP49 MIR4491-201ENST00000581087 68 ntBASIC1.19□□□□□ -2.22
CCDC187A0A096LP49 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 MIR516A2-201ENST00000384888 90 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 MIR516A1-201ENST00000385033 90 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 MIR520H-201ENST00000385126 88 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNA5SP292-201ENST00000390974 118 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNU6-129P-201ENST00000391022 107 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 MIR889-201ENST00000401280 79 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 SNORD111-201ENST00000408139 94 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNA5SP95-201ENST00000410319 137 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNU7-106P-201ENST00000459514 67 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNU6-531P-201ENST00000516694 104 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 SNORA25.16-201ENST00000516741 121 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNU6-557P-201ENST00000516842 110 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 RNA5SP404-201ENST00000517118 132 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 AC036111.3-201ENST00000526389 112 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 AC145423.2-201ENST00000610631 239 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 AC106800.4-201ENST00000614905 153 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 Y_RNA.788-201ENST00000622394 112 ntBASIC1.18□□□□□ -2.22
CCDC187A0A096LP49 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC187A0A096LP49 RNU4-32P-201ENST00000363404 141 ntBASIC1.17□□□□□ -2.22
CCDC187A0A096LP49 RNU6-132P-201ENST00000383863 107 ntBASIC1.17□□□□□ -2.22
CCDC187A0A096LP49 Y_RNA.532-201ENST00000384590 113 ntBASIC1.17□□□□□ -2.22
CCDC187A0A096LP49 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
CCDC187A0A096LP49 MIRLET7A1-201ENST00000362295 80 ntBASIC1.16□□□□□ -2.22
CCDC187A0A096LP49 SNORA63.2-201ENST00000362603 126 ntBASIC1.16□□□□□ -2.22
CCDC187A0A096LP49 SNORD115-37-201ENST00000363768 82 ntBASIC1.16□□□□□ -2.22
CCDC187A0A096LP49 Y_RNA.283-201ENST00000364798 112 ntBASIC1.16□□□□□ -2.22
CCDC187A0A096LP49 RNU1-36P-201ENST00000365130 165 ntBASIC1.16□□□□□ -2.22
CCDC187A0A096LP49 MIR19B1-201ENST00000384829 87 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 245.8 ms