Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 MIR548A1-201ENST00000385041 97 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORD100-201ENST00000408573 76 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU6-1064P-201ENST00000410626 104 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
PCDHGA3Q9Y5H0 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-1335P-201ENST00000365426 107 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-1144P-201ENST00000384247 104 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-476P-201ENST00000384726 107 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 SNORA19-201ENST00000384737 128 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-816P-201ENST00000390914 107 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-1268P-201ENST00000391214 107 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-1239P-201ENST00000391310 107 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-733P-201ENST00000410759 104 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 SNORA25.16-201ENST00000516741 121 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 MTND5P34-201ENST00000568888 325 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 AC011195.1-201ENST00000578177 177 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR1255B1-201ENST00000636325 63 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 AL512310.12-203ENST00000640543 90 ntBASIC0.96□□□□□ -2.26
PCDHGA3Q9Y5H0 AC002350.1-201ENST00000490759 375 ntBASIC0.95□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-531P-201ENST00000516694 104 ntBASIC0.95□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-135P-201ENST00000516769 101 ntBASIC0.95□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.697-201ENST00000516776 113 ntBASIC0.95□□□□□ -2.26
PCDHGA3Q9Y5H0 AC008608.1-201ENST00000603910 127 ntBASIC0.95□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.273-201ENST00000364703 102 ntBASIC0.94□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.281-201ENST00000364774 94 ntBASIC0.94□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.360-201ENST00000365512 102 ntBASIC0.94□□□□□ -2.26
PCDHGA3Q9Y5H0 SNORA7.5-201ENST00000410672 110 ntBASIC0.94□□□□□ -2.26
PCDHGA3Q9Y5H0 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR548H5-201ENST00000580314 60 ntBASIC0.94□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.56-201ENST00000362798 112 ntBASIC0.93□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.536-201ENST00000384621 113 ntBASIC0.93□□□□□ -2.26
PCDHGA3Q9Y5H0 AC244098.3-201ENST00000424803 96 ntBASIC0.93□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR4500-201ENST00000579472 76 ntBASIC0.93□□□□□ -2.26
PCDHGA3Q9Y5H0 AC013244.2-201ENST00000603396 103 ntBASIC0.93□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR376B-201ENST00000614515 100 ntBASIC0.93□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-1313P-201ENST00000362622 102 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 SNORA63.5-201ENST00000363548 123 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR598-201ENST00000384868 97 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR548I2-201ENST00000408348 149 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 AC068339.1-201ENST00000526965 141 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 MIR3612-201ENST00000579753 87 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.92□□□□□ -2.26
PCDHGA3Q9Y5H0 Y_RNA.629-201ENST00000411368 105 ntBASIC0.91□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-469P-201ENST00000516253 101 ntBASIC0.91□□□□□ -2.26
PCDHGA3Q9Y5H0 RNA5SP480-201ENST00000516840 109 ntBASIC0.91□□□□□ -2.26
PCDHGA3Q9Y5H0 AC096720.1-201ENST00000604441 183 ntBASIC0.91□□□□□ -2.26
PCDHGA3Q9Y5H0 RNU6-535P-201ENST00000384722 107 ntBASIC0.9□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR7-2-201ENST00000384970 110 ntBASIC0.9□□□□□ -2.27
PCDHGA3Q9Y5H0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.9□□□□□ -2.27
PCDHGA3Q9Y5H0 CYP3A137P-201ENST00000562436 69 ntBASIC0.9□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR5000-201ENST00000577717 103 ntBASIC0.9□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
PCDHGA3Q9Y5H0 HSBP1P2-201ENST00000299671 229 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 SNORD114-26-201ENST00000363543 72 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 SNORD38.1-201ENST00000363863 68 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-571P-201ENST00000384128 107 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR34C-201ENST00000384831 77 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR5009-201ENST00000578736 100 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 AL035470.1-201ENST00000622571 220 ntBASIC0.89□□□□□ -2.27
PCDHGA3Q9Y5H0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-679P-201ENST00000391003 106 ntBASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-1307P-201ENST00000391012 103 ntBASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 MTND5P40-201ENST00000559945 246 ntBASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 AC138907.6-201ENST00000568401 126 ntBASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 AC138869.1-201ENST00000568623 124 ntBASIC0.88□□□□□ -2.27
PCDHGA3Q9Y5H0 U8.6-201ENST00000364939 135 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 Y_RNA.323-201ENST00000365157 109 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 Y_RNA.377-201ENST00000365644 108 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 Y_RNA.549-201ENST00000384657 102 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR635-201ENST00000384830 98 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR4694-201ENST00000578534 80 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 AL442128.1-201ENST00000615151 90 ntBASIC0.87□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR18A-201ENST00000362310 71 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 Y_RNA.10-201ENST00000362371 110 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 Y_RNA.35-201ENST00000362601 101 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-291P-201ENST00000384720 107 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR605-201ENST00000385078 83 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 MIR146A-201ENST00000385201 99 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-90P-201ENST00000606352 106 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 uc_338.16-201ENST00000621804 95 ntBASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.86□□□□□ -2.27
PCDHGA3Q9Y5H0 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PCDHGA3Q9Y5H0 Y_RNA.291-201ENST00000364886 113 ntBASIC0.85□□□□□ -2.27
PCDHGA3Q9Y5H0 RNY3P2-201ENST00000362918 102 ntBASIC0.84□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-1107P-201ENST00000364817 104 ntBASIC0.84□□□□□ -2.27
PCDHGA3Q9Y5H0 RNU6-1201P-201ENST00000384227 107 ntBASIC0.84□□□□□ -2.27
PCDHGA3Q9Y5H0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.84□□□□□ -2.27
PCDHGA3Q9Y5H0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU4-36P-201ENST00000364294 144 ntBASIC0.82□□□□□ -2.28
PCDHGA3Q9Y5H0 RNU6-1014P-201ENST00000383940 103 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms