Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 TRAJ51-201ENST00000504127 63 ntBASIC2.17□□□□□ -2.06
PCDHB11Q9Y5F2 AL512310.8-201ENST00000550183 120 ntBASIC2.17□□□□□ -2.06
PCDHB11Q9Y5F2 MIR548H5-201ENST00000580314 60 ntBASIC2.17□□□□□ -2.06
PCDHB11Q9Y5F2 MIR219B-201ENST00000637023 88 ntBASIC2.17□□□□□ -2.06
PCDHB11Q9Y5F2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 RNU6-161P-201ENST00000363051 106 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 SNORA25.9-201ENST00000365087 128 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 AC104435.1-201ENST00000483483 166 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 MIR6082-201ENST00000613604 109 ntBASIC2.16□□□□□ -2.06
PCDHB11Q9Y5F2 Y_RNA.13-201ENST00000362403 112 ntBASIC2.15□□□□□ -2.07
PCDHB11Q9Y5F2 SNORD113.3-201ENST00000364630 78 ntBASIC2.15□□□□□ -2.07
PCDHB11Q9Y5F2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PCDHB11Q9Y5F2 RNU6-1054P-201ENST00000411293 104 ntBASIC2.15□□□□□ -2.07
PCDHB11Q9Y5F2 SNORD83.1-201ENST00000411362 77 ntBASIC2.15□□□□□ -2.07
PCDHB11Q9Y5F2 AL627230.6-201ENST00000611129 280 ntBASIC2.15□□□□□ -2.07
PCDHB11Q9Y5F2 MIRLET7F1-201ENST00000362202 87 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 Y_RNA.56-201ENST00000362798 112 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 MIR518E-201ENST00000385252 88 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 MIR764-201ENST00000390811 85 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 RNU7-195P-201ENST00000458793 62 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 RNU6-1108P-201ENST00000516308 104 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 RNA5SP200-201ENST00000516360 103 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 RNU6-765P-201ENST00000516916 99 ntBASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.14□□□□□ -2.07
PCDHB11Q9Y5F2 RNA5SP99-201ENST00000364020 114 ntBASIC2.13□□□□□ -2.07
PCDHB11Q9Y5F2 RNA5SP458-201ENST00000516188 119 ntBASIC2.13□□□□□ -2.07
PCDHB11Q9Y5F2 MIR3198-2-201ENST00000577868 80 ntBASIC2.13□□□□□ -2.07
PCDHB11Q9Y5F2 Y_RNA.788-201ENST00000622394 112 ntBASIC2.13□□□□□ -2.07
PCDHB11Q9Y5F2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDHB11Q9Y5F2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDHB11Q9Y5F2 RNU6-1260P-201ENST00000362944 107 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 RNU6-934P-201ENST00000365154 107 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 Y_RNA.330-201ENST00000365230 109 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 AL356379.1-201ENST00000414105 126 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 RNA5SP233-201ENST00000459153 113 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 AC048334.1-201ENST00000477975 159 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 Y_RNA.809-201ENST00000516058 95 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 AC036111.3-201ENST00000526389 112 ntBASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC2.12□□□□□ -2.07
PCDHB11Q9Y5F2 SNORA64-201ENST00000384674 134 ntBASIC2.11□□□□□ -2.07
PCDHB11Q9Y5F2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDHB11Q9Y5F2 SNORD77.2-201ENST00000391045 68 ntBASIC2.11□□□□□ -2.07
PCDHB11Q9Y5F2 AC092628.1-201ENST00000436250 252 ntBASIC2.11□□□□□ -2.07
PCDHB11Q9Y5F2 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDHB11Q9Y5F2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
PCDHB11Q9Y5F2 Y_RNA.264-201ENST00000364665 102 ntBASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 MIR520H-201ENST00000385126 88 ntBASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 MIR125B2-201ENST00000385128 89 ntBASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 SNORA75.2-201ENST00000391138 150 ntBASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 SNORA75.3-201ENST00000391231 150 ntBASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 TRDV1-202ENST00000621643 102 ntBASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.1□□□□□ -2.07
PCDHB11Q9Y5F2 Y_RNA.42-201ENST00000362660 108 ntBASIC2.09□□□□□ -2.07
PCDHB11Q9Y5F2 SCARNA18B-201ENST00000458806 135 ntBASIC2.09□□□□□ -2.07
PCDHB11Q9Y5F2 MIR4771-2-201ENST00000577758 74 ntBASIC2.09□□□□□ -2.07
PCDHB11Q9Y5F2 MIR4771-1-201ENST00000582617 74 ntBASIC2.09□□□□□ -2.07
PCDHB11Q9Y5F2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PCDHB11Q9Y5F2 RPS27P16-201ENST00000425758 201 ntBASIC2.08□□□□□ -2.08
PCDHB11Q9Y5F2 AC015818.7-201ENST00000428754 109 ntBASIC2.08□□□□□ -2.08
PCDHB11Q9Y5F2 AC004223.1-201ENST00000479840 271 ntBASIC2.08□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6-208P-201ENST00000362431 107 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 Y_RNA.532-201ENST00000384590 113 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6-788P-201ENST00000390967 104 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 AL606490.4-201ENST00000423117 127 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 AC097635.1-201ENST00000450678 155 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 SNORA31.2-201ENST00000516019 134 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6-523P-201ENST00000516304 54 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 Y_RNA.676-201ENST00000516393 96 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 Y_RNA.697-201ENST00000516776 113 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 RN7SKP88-201ENST00000516847 250 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6-295P-201ENST00000516901 104 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 7SK.8-201ENST00000612110 250 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 AC106800.4-201ENST00000614905 153 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 7SK.11-201ENST00000615477 250 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 7SK.13-201ENST00000622040 250 ntBASIC2.07□□□□□ -2.08
PCDHB11Q9Y5F2 RNU1-78P-201ENST00000391248 165 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 SNORD111-201ENST00000408139 94 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6-448P-201ENST00000517052 107 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 MIR3134-201ENST00000579433 74 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 MIR1297-201ENST00000637311 77 ntBASIC2.06□□□□□ -2.08
PCDHB11Q9Y5F2 RNA5SP37-201ENST00000365420 130 ntBASIC2.05□□□□□ -2.08
PCDHB11Q9Y5F2 SNORD90-201ENST00000391145 111 ntBASIC2.05□□□□□ -2.08
PCDHB11Q9Y5F2 AL603825.1-201ENST00000438481 80 ntBASIC2.05□□□□□ -2.08
PCDHB11Q9Y5F2 RNU6-807P-201ENST00000516805 107 ntBASIC2.05□□□□□ -2.08
PCDHB11Q9Y5F2 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHB11Q9Y5F2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
PCDHB11Q9Y5F2 Y_RNA.239-201ENST00000364444 113 ntBASIC2.04□□□□□ -2.08
PCDHB11Q9Y5F2 Y_RNA.363-201ENST00000365529 113 ntBASIC2.04□□□□□ -2.08
PCDHB11Q9Y5F2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 203.5 ms