Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 Y_RNA.264-201ENST00000364665 102 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RNU6-686P-201ENST00000364839 107 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 SNORD77.2-201ENST00000391045 68 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RNU6-1254P-201ENST00000391266 104 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 MIR1265-201ENST00000408444 86 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 snoU13.17-201ENST00000458802 104 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 Y_RNA.648-201ENST00000459455 110 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 RNU6-1108P-201ENST00000516308 104 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 YWHAEP2-201ENST00000580066 112 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 MIR5694-201ENST00000581190 76 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 YWHAEP3-201ENST00000582767 121 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.16□□□□□ -2.22
NOTCH3Q9UM47 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
NOTCH3Q9UM47 AC245060.5-201ENST00000610778 3293 ntBASIC1.15□□□□□ -2.22
NOTCH3Q9UM47 ZNF209P-201ENST00000593450 2304 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 RNU1-109P-201ENST00000383960 147 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 MIR193B-201ENST00000384907 83 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 MIR548U-201ENST00000390728 81 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 RNU6-243P-201ENST00000391140 107 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 RNU6-634P-201ENST00000459134 106 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 RNU6-75P-201ENST00000515944 104 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 MIR1273G-201ENST00000577677 100 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 RNU5F-1-201ENST00000362507 117 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 Y_RNA.371-201ENST00000365591 113 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 MIR216A-201ENST00000385063 110 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 RNU7-26P-201ENST00000458980 63 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 SNORA31.10-201ENST00000516482 106 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 AP001362.1-201ENST00000625165 124 ntBASIC1.15□□□□□ -2.23
NOTCH3Q9UM47 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 RNU6-132P-201ENST00000383863 107 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 Y_RNA.491-201ENST00000384417 107 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 RNU6-649P-201ENST00000384463 107 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 MIR1283-2-201ENST00000408621 87 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 snoU13.11-201ENST00000459219 104 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 Y_RNA.660-201ENST00000516002 120 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 RNU6-850P-201ENST00000516934 103 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 MIR4709-201ENST00000577272 72 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 AL020996.3-201ENST00000606617 222 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 Y_RNA.173-201ENST00000363776 113 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 SNORA16.1-201ENST00000364597 132 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 RNU1-93P-201ENST00000364704 169 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 RNA5SP237-201ENST00000410414 113 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 CYP3A52P-201ENST00000563326 91 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 MIR3134-201ENST00000579433 74 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 MIR4251-201ENST00000635819 61 ntBASIC1.14□□□□□ -2.23
NOTCH3Q9UM47 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NOTCH3Q9UM47 RNU6-957P-201ENST00000363652 99 ntBASIC1.13□□□□□ -2.23
NOTCH3Q9UM47 RNU6-811P-201ENST00000384069 107 ntBASIC1.13□□□□□ -2.23
NOTCH3Q9UM47 MIR520A-201ENST00000384862 85 ntBASIC1.13□□□□□ -2.23
NOTCH3Q9UM47 RN7SL793P-201ENST00000583259 296 ntBASIC1.13□□□□□ -2.23
NOTCH3Q9UM47 AC022202.1-201ENST00000613515 211 ntBASIC1.13□□□□□ -2.23
NOTCH3Q9UM47 SNORD115-22-201ENST00000364456 82 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 RNA5SP492-201ENST00000411330 114 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 CYP3A137P-201ENST00000562436 69 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 MIR548AO-201ENST00000579992 96 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 MIR4264-201ENST00000583520 66 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 RNA5SP363-201ENST00000365072 115 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 MIR9-2-201ENST00000384838 87 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 RNA5SP465-201ENST00000391195 109 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 MIR1185-1-201ENST00000408598 86 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 AC244023.1-201ENST00000426884 112 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 SNORA18.5-201ENST00000516616 101 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 MIR3126-201ENST00000577443 74 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 AC242498.1-201ENST00000604134 111 ntBASIC1.12□□□□□ -2.23
NOTCH3Q9UM47 RNY1P2-201ENST00000364820 117 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 RNU6-396P-201ENST00000365369 105 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 SNORA72.6-201ENST00000384520 129 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 MIR627-201ENST00000384979 97 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 SNORD123-201ENST00000459473 70 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 AC012493.3-201ENST00000604494 112 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 RNU6-380P-201ENST00000410207 107 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 AC074348.1-201ENST00000426503 132 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 AC015818.7-201ENST00000428754 109 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 RNU7-41P-201ENST00000515917 61 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 MIR3675-201ENST00000583661 73 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 AL590095.2-201ENST00000604136 117 ntBASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
NOTCH3Q9UM47 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 RNU6-681P-201ENST00000364012 104 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 Y_RNA.386-201ENST00000383913 105 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 RNU6-997P-201ENST00000384725 107 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 RNU6-360P-201ENST00000390944 104 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 AC141846.1-201ENST00000568348 142 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 Y_RNA.98-201ENST00000363109 102 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 RNU6-112P-201ENST00000363599 104 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 SNORD115-31-201ENST00000365318 82 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 MIR194-1-201ENST00000384892 85 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 MIR758-201ENST00000390227 88 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 AL606490.4-201ENST00000423117 127 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 AL109933.3-201ENST00000619095 188 ntBASIC1.1□□□□□ -2.23
NOTCH3Q9UM47 MIR424-201ENST00000362227 98 ntBASIC1.09□□□□□ -2.23
NOTCH3Q9UM47 RNU6-499P-201ENST00000365615 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms