Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 Y_RNA.386-201ENST00000383913 105 ntBASIC2□□□□□ -2.09
RC3H2Q9HBD1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2□□□□□ -2.09
RC3H2Q9HBD1 AL161935.2-201ENST00000414627 60 ntBASIC2□□□□□ -2.09
RC3H2Q9HBD1 RNU6-717P-201ENST00000459076 104 ntBASIC2□□□□□ -2.09
RC3H2Q9HBD1 RNU6-322P-201ENST00000516010 103 ntBASIC2□□□□□ -2.09
RC3H2Q9HBD1 AL096861.1-201ENST00000610899 123 ntBASIC2□□□□□ -2.09
RC3H2Q9HBD1 MIR664A-201ENST00000626086 82 ntBASIC2□□□□□ -2.09
RC3H2Q9HBD1 AL161722.3-201ENST00000605789 2983 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 MIR378A-201ENST00000362177 66 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 SNORA25.9-201ENST00000365087 128 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 SNORD77.2-201ENST00000391045 68 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 RNU6-321P-201ENST00000410912 106 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 snoU13.25-201ENST00000458945 104 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 RNU6-634P-201ENST00000459134 106 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 RNU6-871P-201ENST00000516122 100 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 MIR8074-201ENST00000615081 81 ntBASIC1.99□□□□□ -2.09
RC3H2Q9HBD1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 MIRLET7F1-201ENST00000362202 87 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 RNA5SP160-201ENST00000364866 120 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 Y_RNA.491-201ENST00000384417 107 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 MIR513A1-201ENST00000385138 129 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 RNU7-106P-201ENST00000459514 67 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 RNU6-70P-201ENST00000516438 60 ntBASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RC3H2Q9HBD1 Y_RNA.340-201ENST00000365330 92 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 RNU6-243P-201ENST00000391140 107 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 RNU4-62P-201ENST00000410125 130 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 RNA5SP338-201ENST00000410495 85 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 AP1B1P2-201ENST00000416196 106 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 AC074348.1-201ENST00000426503 132 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 SNORA25.15-201ENST00000516487 89 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 SNORD92-201ENST00000585078 85 ntBASIC1.97□□□□□ -2.09
RC3H2Q9HBD1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 RNU6-208P-201ENST00000362431 107 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 SNORA25.3-201ENST00000363205 127 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 RNU6-205P-201ENST00000390858 107 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 RNU6-807P-201ENST00000516805 107 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 RNU1-40P-201ENST00000516816 164 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 RNU1-97P-201ENST00000516872 164 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 MIR4264-201ENST00000583520 66 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 AL357312.1-201ENST00000603879 298 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 MIR1297-201ENST00000637311 77 ntBASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RC3H2Q9HBD1 RNU6-957P-201ENST00000363652 99 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 AC245517.4-201ENST00000448601 281 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 AC125388.1-201ENST00000459631 156 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 Y_RNA.681-201ENST00000516445 113 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 RNU6-922P-201ENST00000516753 99 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 SNORA44.1-201ENST00000517031 108 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 RNU6-303P-201ENST00000517091 106 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 MIR4303-201ENST00000581299 66 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 MIR8081-201ENST00000611533 95 ntBASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
RC3H2Q9HBD1 RNU6-396P-201ENST00000365369 105 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 MIR518E-201ENST00000385252 88 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 MIR548U-201ENST00000390728 81 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 SNORA67.5-201ENST00000391036 107 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 RNU6-466P-201ENST00000391224 103 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 RNU7-62P-201ENST00000458856 62 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 RNU6-531P-201ENST00000516694 104 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 SNORA25.16-201ENST00000516741 121 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 AL359821.1-201ENST00000605519 182 ntBASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RC3H2Q9HBD1 RNU5F-1-201ENST00000362507 117 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 Y_RNA.264-201ENST00000364665 102 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 MT-TF-201ENST00000387314 71 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 MT-TN-201ENST00000387400 73 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 Y_RNA.588-201ENST00000391254 102 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 RNU6-587P-201ENST00000391282 106 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 MIR1287-201ENST00000408492 90 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 SNORD63B-201ENST00000411005 70 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 AC015818.7-201ENST00000428754 109 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 AP003716.2-201ENST00000528260 108 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 MIR4491-201ENST00000581087 68 ntBASIC1.93□□□□□ -2.1
RC3H2Q9HBD1 RNU6-540P-201ENST00000384622 101 ntBASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 Y_RNA.596-201ENST00000410462 109 ntBASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 snoU13.17-201ENST00000458802 104 ntBASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 snoU13.9-201ENST00000458927 103 ntBASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 MIR8063-201ENST00000621930 81 ntBASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
RC3H2Q9HBD1 RPL30P7-201ENST00000479312 323 ntBASIC1.91□□□□□ -2.1
RC3H2Q9HBD1 SNORA77B-201ENST00000578179 125 ntBASIC1.91□□□□□ -2.1
RC3H2Q9HBD1 MIR8070-201ENST00000616510 88 ntBASIC1.91□□□□□ -2.1
RC3H2Q9HBD1 MIR6516-201ENST00000630554 81 ntBASIC1.91□□□□□ -2.1
RC3H2Q9HBD1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.91□□□□□ -2.1
RC3H2Q9HBD1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 253.5 ms