Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 Y_RNA.555-201ENST00000384673 110 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 MIR34C-201ENST00000384831 77 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 BX276092.1-201ENST00000427368 251 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 AL158147.1-201ENST00000443970 75 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 RNU7-48P-201ENST00000458875 63 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 TRAJ51-201ENST00000504127 63 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 RNU7-6P-201ENST00000516845 62 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 MIR4500-201ENST00000579472 76 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 RNU1-29P-201ENST00000606574 126 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 AC098479.1-201ENST00000609225 154 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 TUG1_4.1-201ENST00000619464 181 ntBASIC0.23□□□□□ -2.37
NANOGQ9H9S0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
NANOGQ9H9S0 Y_RNA.49-201ENST00000362714 112 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 Y_RNA.127-201ENST00000363386 109 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 Y_RNA.299-201ENST00000364973 94 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 SNORD115-35-201ENST00000365122 82 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 RNU6-907P-201ENST00000390924 102 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 MIR1263-201ENST00000408324 86 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 MTND4LP9-201ENST00000427694 174 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 SNORA62.5-201ENST00000516634 120 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 RNU7-161P-201ENST00000517289 62 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 MIR3671-201ENST00000580455 88 ntBASIC0.22□□□□□ -2.37
NANOGQ9H9S0 Y_RNA.56-201ENST00000362798 112 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.328-201ENST00000365208 113 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.525-201ENST00000384570 113 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 RNU6-429P-201ENST00000384582 108 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 AL353813.1-201ENST00000440700 253 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 AC244505.6-201ENST00000452829 130 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 MIR4639-201ENST00000584938 69 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
NANOGQ9H9S0 MIR101-2-201ENST00000362195 79 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 SNORD115-24-201ENST00000363528 82 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 RNU6-716P-201ENST00000365621 103 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.488-201ENST00000384403 102 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 MIRLET7F2-201ENST00000385277 83 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 RNU6-257P-201ENST00000410238 98 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 SNORD71-201ENST00000411292 86 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.630-201ENST00000411370 108 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 RNA5SP227-201ENST00000516184 113 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 RNU6-521P-201ENST00000516663 105 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 RNU6-1212P-201ENST00000517023 104 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.2□□□□□ -2.38
NANOGQ9H9S0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.2□□□□□ -2.38
NANOGQ9H9S0 SNORD115-19-201ENST00000363098 82 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 SNORD115-18-201ENST00000363293 82 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 SNORD115-17-201ENST00000364612 82 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.464-201ENST00000384282 110 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 MT-TR-201ENST00000387439 65 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 SNORD77B-201ENST00000391112 67 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 RNU7-106P-201ENST00000459514 67 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 U7.2-201ENST00000607576 63 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.19□□□□□ -2.38
NANOGQ9H9S0 AC090625.1-201ENST00000357130 210 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.98-201ENST00000363109 102 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.198-201ENST00000364013 98 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 RNU6-647P-201ENST00000364243 107 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.221-201ENST00000364248 96 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 RNU6-1229P-201ENST00000364295 107 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.247-201ENST00000364500 92 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 RNU6-726P-201ENST00000364680 107 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.344-201ENST00000365381 112 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 RNU2-59P-201ENST00000410482 191 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 MIR4514-201ENST00000581410 57 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 AP001362.1-201ENST00000625165 124 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 AC091304.10-201ENST00000641554 121 ntBASIC0.18□□□□□ -2.38
NANOGQ9H9S0 RNA5SP403-201ENST00000363598 108 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.528-201ENST00000384575 108 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 MIR7-2-201ENST00000384970 110 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 MIR548I1-201ENST00000408810 149 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 AC073261.1-201ENST00000429409 121 ntBASIC0.17□□□□□ -2.38
NANOGQ9H9S0 RNU6-865P-201ENST00000364772 107 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 Y_RNA.360-201ENST00000365512 102 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 RNU6-1126P-201ENST00000384002 107 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 SNORA7.5-201ENST00000410672 110 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 RNU7-195P-201ENST00000458793 62 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 RNU7-107P-201ENST00000459121 61 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 RNU7-104P-201ENST00000459398 79 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 RNU6-135P-201ENST00000516769 101 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 RNU6-1006P-201ENST00000516998 103 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 AC138869.1-201ENST00000568623 124 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 MIR3163-201ENST00000581592 73 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 SNORA70.25-201ENST00000612741 95 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 MIR6779-201ENST00000617283 64 ntBASIC0.16□□□□□ -2.38
NANOGQ9H9S0 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 SNORD58C-201ENST00000365223 64 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 SNORA2A-201ENST00000383885 135 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 MIR635-201ENST00000384830 98 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 MIR548D2-201ENST00000384955 97 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
NANOGQ9H9S0 SNORD63B-201ENST00000411005 70 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms