Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-726P-201ENST00000364680 107 ntBASIC0.06□□□□□ -2.4
FOXC2Q99958 Y_RNA.298-201ENST00000364960 107 ntBASIC0.06□□□□□ -2.4
FOXC2Q99958 Y_RNA.299-201ENST00000364973 94 ntBASIC0.06□□□□□ -2.4
FOXC2Q99958 RNU6-1135P-201ENST00000411083 103 ntBASIC0.06□□□□□ -2.4
FOXC2Q99958 RNA5SP403-201ENST00000363598 108 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU6-200P-201ENST00000364743 107 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU6-1104P-201ENST00000384723 104 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU6-1321P-201ENST00000390905 107 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU6-1307P-201ENST00000391012 103 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 AC108059.2-201ENST00000434626 151 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU6-758P-201ENST00000516292 89 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 Y_RNA.686-201ENST00000516548 134 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 RNU7-161P-201ENST00000517289 62 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 AC105081.1-201ENST00000617727 106 ntBASIC0.05□□□□□ -2.4
FOXC2Q99958 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.04□□□□□ -2.4
FOXC2Q99958 Y_RNA.362-201ENST00000365518 110 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 MIR206-201ENST00000384872 86 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 Y_RNA.584-201ENST00000391090 114 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 PCNPP3-201ENST00000393579 471 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 Y_RNA.700-201ENST00000516806 100 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 DEFB131E-201ENST00000532329 154 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 AP002392.1-201ENST00000537692 208 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 AC108081.1-201ENST00000604358 221 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 AC096720.1-201ENST00000604441 183 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 AL162376.1-201ENST00000624117 175 ntBASIC0.04□□□□□ -2.4
FOXC2Q99958 SNORA9.1-201ENST00000362412 131 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 RNU6-449P-201ENST00000383914 107 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 SNORD41.1-201ENST00000391000 69 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 RNU6-138P-201ENST00000515952 107 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 RNU6-1232P-201ENST00000516299 86 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 Y_RNA.690-201ENST00000516603 95 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 RNU6-861P-201ENST00000516745 106 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 AC138869.1-201ENST00000568623 124 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 MIR3121-201ENST00000579680 77 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 MIR548H5-201ENST00000580314 60 ntBASIC0.03□□□□□ -2.4
FOXC2Q99958 MIR101-2-201ENST00000362195 79 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.49-201ENST00000362714 112 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 RNU6-161P-201ENST00000363051 106 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.127-201ENST00000363386 109 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 SNORD115-24-201ENST00000363528 82 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.188-201ENST00000363952 111 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 SNORD114-15-201ENST00000364687 72 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.272-201ENST00000364696 102 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.423-201ENST00000384057 113 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.785-201ENST00000384290 109 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 MIR519A1-201ENST00000385257 85 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 RNU6-127P-201ENST00000390897 107 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 Y_RNA.580-201ENST00000391004 95 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 TRAJ51-201ENST00000504127 63 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 RNU6-1271P-201ENST00000517049 105 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 MIR4752-201ENST00000579672 72 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 MIR4290-201ENST00000583807 95 ntBASIC0.02□□□□□ -2.41
FOXC2Q99958 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.01□□□□□ -2.41
FOXC2Q99958 Y_RNA.98-201ENST00000363109 102 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 SNORD114-31-201ENST00000363219 75 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 RNA5SP128-201ENST00000365305 116 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 SNORD18B-201ENST00000365659 72 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 Y_RNA.552-201ENST00000384665 112 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 MT-TI-201ENST00000387365 69 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 RNU6-394P-201ENST00000410735 107 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 RNU7-48P-201ENST00000458875 63 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 IGKV1-22-201ENST00000524313 326 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 AL137067.1-201ENST00000615933 120 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 AC087741.2-201ENST00000619415 172 ntBASIC0.01□□□□□ -2.41
FOXC2Q99958 SNORD115-35-201ENST00000365122 82 ntBASIC0□□□□□ -2.41
FOXC2Q99958 Y_RNA.401-201ENST00000383965 117 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RNU6-30P-201ENST00000384561 107 ntBASIC0□□□□□ -2.41
FOXC2Q99958 MIR548I2-201ENST00000408348 149 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RPL39P34-201ENST00000477141 156 ntBASIC0□□□□□ -2.41
FOXC2Q99958 Y_RNA.662-201ENST00000516028 97 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RNU7-2P-201ENST00000516096 62 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RNY4P20-201ENST00000516678 93 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RNU6-388P-201ENST00000517012 105 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RNU6-389P-201ENST00000517048 105 ntBASIC0□□□□□ -2.41
FOXC2Q99958 MIR4743-201ENST00000584576 69 ntBASIC0□□□□□ -2.41
FOXC2Q99958 AC104408.1-201ENST00000605241 170 ntBASIC0□□□□□ -2.41
FOXC2Q99958 RNU7-10P-201ENST00000607194 63 ntBASIC0□□□□□ -2.41
FOXC2Q99958 AC004792.1-201ENST00000614523 137 ntBASIC0□□□□□ -2.41
FOXC2Q99958 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 SNORD114-16-201ENST00000363044 70 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 RNU6-616P-201ENST00000384353 107 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 MIR635-201ENST00000384830 98 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 MIR760-201ENST00000390220 80 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 SNORD37.2-201ENST00000391075 66 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 AC074198.2-201ENST00000508153 258 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 RNU6-782P-201ENST00000516852 104 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 MIR4500-201ENST00000579472 76 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 MIR5706-201ENST00000579841 80 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 uc_338.28-201ENST00000612082 187 ntBASIC-0.01□□□□□ -2.41
FOXC2Q99958 SNORD115-19-201ENST00000363098 82 ntBASIC-0.02□□□□□ -2.41
FOXC2Q99958 SNORD115-18-201ENST00000363293 82 ntBASIC-0.02□□□□□ -2.41
FOXC2Q99958 SNORD115-17-201ENST00000364612 82 ntBASIC-0.02□□□□□ -2.41
FOXC2Q99958 RNU4-11P-201ENST00000365287 132 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 239.1 ms