Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 MIR644A-201ENST00000385262 94 ntBASIC0.1□□□□□ -2.39
SCN2AQ99250 RNU6-735P-201ENST00000410612 107 ntBASIC0.1□□□□□ -2.39
SCN2AQ99250 MIR643-201ENST00000385267 97 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 RNU4-69P-201ENST00000410677 143 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 RNU7-159P-201ENST00000459284 62 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 RNU7-120P-201ENST00000459334 63 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 TRAJ51-201ENST00000504127 63 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 RNA5SP47-201ENST00000517230 109 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 MIR4802-201ENST00000581881 80 ntBASIC0.09□□□□□ -2.39
SCN2AQ99250 SNORD115-19-201ENST00000363098 82 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 SNORD115-18-201ENST00000363293 82 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 SNORA63.5-201ENST00000363548 123 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 SNORD115-17-201ENST00000364612 82 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 MIR617-201ENST00000385030 97 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 Y_RNA.660-201ENST00000516002 120 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 Y_RNA.686-201ENST00000516548 134 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 MIR5190-201ENST00000581537 80 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 MIR548AE2-201ENST00000583456 67 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.09□□□□□ -2.4
SCN2AQ99250 SNORD115-35-201ENST00000365122 82 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 MIR610-201ENST00000385139 96 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 SNORD77B-201ENST00000391112 67 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 MTATP6P21-201ENST00000440681 189 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 RNA5SP268-201ENST00000516828 124 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 RNU6-782P-201ENST00000516852 104 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 MIR548AD-201ENST00000584780 82 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 AC108081.1-201ENST00000604358 221 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 Y_RNA.144-201ENST00000363521 113 ntBASIC0.08□□□□□ -2.4
SCN2AQ99250 MIR892B-201ENST00000401279 77 ntBASIC0.07□□□□□ -2.4
SCN2AQ99250 RNU7-164P-201ENST00000459221 62 ntBASIC0.07□□□□□ -2.4
SCN2AQ99250 AC004792.1-201ENST00000614523 137 ntBASIC0.07□□□□□ -2.4
SCN2AQ99250 Y_RNA.778-201ENST00000620203 90 ntBASIC0.07□□□□□ -2.4
SCN2AQ99250 MIR6828-201ENST00000636181 60 ntBASIC0.07□□□□□ -2.4
SCN2AQ99250 RNU6-647P-201ENST00000364243 107 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 Y_RNA.240-201ENST00000364469 95 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU6-80P-201ENST00000384195 107 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 SNORD38.2-201ENST00000384470 69 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 MIR548I2-201ENST00000408348 149 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU6-1018P-201ENST00000516577 106 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 AL359881.1-201ENST00000602916 267 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU1-29P-201ENST00000606574 126 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 FTX_2.1-201ENST00000618816 94 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU6-1163P-201ENST00000364516 107 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 Y_RNA.552-201ENST00000384665 112 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU6-460P-201ENST00000391158 108 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 AC074198.2-201ENST00000508153 258 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU6-138P-201ENST00000515952 107 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 RNU7-2P-201ENST00000516096 62 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.06□□□□□ -2.4
SCN2AQ99250 MIR7107-201ENST00000611489 80 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 MIR376B-201ENST00000614515 100 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 TUG1_4.1-201ENST00000619464 181 ntBASIC0.06□□□□□ -2.4
SCN2AQ99250 Y_RNA.56-201ENST00000362798 112 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 Y_RNA.170-201ENST00000363746 110 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 RNU6-865P-201ENST00000364772 107 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 Y_RNA.298-201ENST00000364960 107 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 RNU6-1318P-201ENST00000365389 103 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 Y_RNA.441-201ENST00000384123 112 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 MIR759-201ENST00000390224 91 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 AC244505.6-201ENST00000452829 130 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.05□□□□□ -2.4
SCN2AQ99250 Y_RNA.343-201ENST00000365354 112 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 Y_RNA.507-201ENST00000384500 99 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 MT-TI-201ENST00000387365 69 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 SCARNA16.5-201ENST00000517114 183 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 MIR3144-201ENST00000579460 79 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 Y_RNA.29-201ENST00000362570 113 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 Y_RNA.35-201ENST00000362601 101 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 RNU6-1229P-201ENST00000364295 107 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 Y_RNA.360-201ENST00000365512 102 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 SNORA75.1-201ENST00000391130 148 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 MIR4290-201ENST00000583807 95 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 AC087741.2-201ENST00000619415 172 ntBASIC0.04□□□□□ -2.4
SCN2AQ99250 Y_RNA.49-201ENST00000362714 112 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 RNU6-1260P-201ENST00000362944 107 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 Y_RNA.257-201ENST00000364596 102 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 Y_RNA.323-201ENST00000365157 109 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 SNORD116-18-201ENST00000383961 92 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 MIR501-201ENST00000390204 84 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 MIR548H2-201ENST00000408874 88 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 AC007012.1-201ENST00000567192 175 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 U7.2-201ENST00000607576 63 ntBASIC0.03□□□□□ -2.4
SCN2AQ99250 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.03□□□□□ -2.4
SCN2AQ99250 SNORD114-16-201ENST00000363044 70 ntBASIC0.03□□□□□ -2.41
SCN2AQ99250 Y_RNA.448-201ENST00000384185 108 ntBASIC0.03□□□□□ -2.41
SCN2AQ99250 MIR1265-201ENST00000408444 86 ntBASIC0.03□□□□□ -2.41
SCN2AQ99250 RNU7-197P-201ENST00000458836 62 ntBASIC0.03□□□□□ -2.41
SCN2AQ99250 Y_RNA.651-201ENST00000459380 103 ntBASIC0.03□□□□□ -2.41
SCN2AQ99250 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
SCN2AQ99250 RNU7-129P-201ENST00000516128 62 ntBASIC0.02□□□□□ -2.41
SCN2AQ99250 Y_RNA.690-201ENST00000516603 95 ntBASIC0.02□□□□□ -2.41
SCN2AQ99250 Y_RNA.700-201ENST00000516806 100 ntBASIC0.02□□□□□ -2.41
SCN2AQ99250 SNORD41.1-201ENST00000391000 69 ntBASIC0.01□□□□□ -2.41
SCN2AQ99250 RNU6-269P-201ENST00000391077 97 ntBASIC0.01□□□□□ -2.41
SCN2AQ99250 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.01□□□□□ -2.41
SCN2AQ99250 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.01□□□□□ -2.41
SCN2AQ99250 MIR8066-201ENST00000617280 78 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms