Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
NUDCD1Q96RS6 Y_RNA.49-201ENST00000362714 112 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 Y_RNA.127-201ENST00000363386 109 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 Y_RNA.198-201ENST00000364013 98 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 MIR598-201ENST00000384868 97 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 MIR3163-201ENST00000581592 73 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 AP001362.1-201ENST00000625165 124 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 MIR1255B1-201ENST00000636325 63 ntBASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
NUDCD1Q96RS6 SNORD115-19-201ENST00000363098 82 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 SNORD115-18-201ENST00000363293 82 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 SNORD115-17-201ENST00000364612 82 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 RNU6-865P-201ENST00000364772 107 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.528-201ENST00000384575 108 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.568-201ENST00000384742 113 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 MIR216A-201ENST00000385063 110 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 RNU6-257P-201ENST00000410238 98 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 RNA5SP136-201ENST00000410906 107 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 AC069271.1-201ENST00000445577 156 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 RNA5SP227-201ENST00000516184 113 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 RNU6-1234P-201ENST00000516877 103 ntBASIC0.34□□□□□ -2.36
NUDCD1Q96RS6 SNORD115-24-201ENST00000363528 82 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.213-201ENST00000364178 111 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 MIR34C-201ENST00000384831 77 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 AC244505.6-201ENST00000452829 130 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 TRAJ51-201ENST00000504127 63 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 TUG1_4.1-201ENST00000619464 181 ntBASIC0.33□□□□□ -2.36
NUDCD1Q96RS6 RNU6-209P-201ENST00000384118 107 ntBASIC0.32□□□□□ -2.36
NUDCD1Q96RS6 MIR548I1-201ENST00000408810 149 ntBASIC0.32□□□□□ -2.36
NUDCD1Q96RS6 RNU6-521P-201ENST00000516663 105 ntBASIC0.32□□□□□ -2.36
NUDCD1Q96RS6 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.32□□□□□ -2.36
NUDCD1Q96RS6 MIR548H5-201ENST00000580314 60 ntBASIC0.32□□□□□ -2.36
NUDCD1Q96RS6 AC091304.10-201ENST00000641554 121 ntBASIC0.32□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.343-201ENST00000365354 112 ntBASIC0.31□□□□□ -2.36
NUDCD1Q96RS6 RNY1P5-201ENST00000383890 115 ntBASIC0.31□□□□□ -2.36
NUDCD1Q96RS6 RNU6-1061P-201ENST00000516530 99 ntBASIC0.31□□□□□ -2.36
NUDCD1Q96RS6 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
NUDCD1Q96RS6 PVT1_3.1-201ENST00000620853 95 ntBASIC0.31□□□□□ -2.36
NUDCD1Q96RS6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
NUDCD1Q96RS6 SNORD58C-201ENST00000365223 64 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 RNU6-187P-201ENST00000384139 106 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 MT-TR-201ENST00000387439 65 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 SNORA40-201ENST00000388090 126 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 RNU2-59P-201ENST00000410482 191 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 RNU7-161P-201ENST00000517289 62 ntBASIC0.3□□□□□ -2.36
NUDCD1Q96RS6 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.118-201ENST00000363300 101 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 RNA5SP62-201ENST00000363457 110 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.360-201ENST00000365512 102 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 RNU6-716P-201ENST00000365621 103 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 MIR635-201ENST00000384830 98 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 MIR489-201ENST00000384923 84 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 MIR548D2-201ENST00000384955 97 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 MIR759-201ENST00000390224 91 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 AC025166.1-201ENST00000612411 163 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 MIR6755-201ENST00000619993 66 ntBASIC0.29□□□□□ -2.36
NUDCD1Q96RS6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.28□□□□□ -2.36
NUDCD1Q96RS6 RNU6-815P-201ENST00000384080 113 ntBASIC0.28□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.630-201ENST00000411370 108 ntBASIC0.28□□□□□ -2.36
NUDCD1Q96RS6 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
NUDCD1Q96RS6 Y_RNA.344-201ENST00000365381 112 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 Y_RNA.525-201ENST00000384570 113 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 MIR599-201ENST00000385069 95 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 SNORA7.5-201ENST00000410672 110 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 RNU6-1211P-201ENST00000459179 105 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 RNU6-971P-201ENST00000516920 106 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 MIR4752-201ENST00000579672 72 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 RNU7-10P-201ENST00000607194 63 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 MTND5P18-201ENST00000445624 1801 ntBASIC0.27□□□□□ -2.37
NUDCD1Q96RS6 SNORD114-23-201ENST00000363536 72 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 Y_RNA.221-201ENST00000364248 96 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 RNU6-726P-201ENST00000364680 107 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 AC073261.1-201ENST00000429409 121 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 RNU7-104P-201ENST00000459398 79 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 RNU6-772P-201ENST00000516042 105 ntBASIC0.26□□□□□ -2.37
NUDCD1Q96RS6 RNA5SP403-201ENST00000363598 108 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 Y_RNA.586-201ENST00000391146 98 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 MIR548I2-201ENST00000408348 149 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 SNORD63B-201ENST00000411005 70 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 AL353813.1-201ENST00000440700 253 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 RNU7-195P-201ENST00000458793 62 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 RNU7-107P-201ENST00000459121 61 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
NUDCD1Q96RS6 RNU6-774P-201ENST00000363238 107 ntBASIC0.24□□□□□ -2.37
NUDCD1Q96RS6 AC097635.1-201ENST00000450678 155 ntBASIC0.24□□□□□ -2.37
NUDCD1Q96RS6 RNU7-106P-201ENST00000459514 67 ntBASIC0.24□□□□□ -2.37
NUDCD1Q96RS6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.24□□□□□ -2.37
NUDCD1Q96RS6 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.24□□□□□ -2.37
NUDCD1Q96RS6 RNU6-170P-201ENST00000362832 104 ntBASIC0.23□□□□□ -2.37
NUDCD1Q96RS6 RNU6-850P-201ENST00000516934 103 ntBASIC0.23□□□□□ -2.37
NUDCD1Q96RS6 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
NUDCD1Q96RS6 MIR3133-201ENST00000583157 78 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 171.9 ms