Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RNU6-815P-201ENST00000384080 113 ntBASIC0.17□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-616P-201ENST00000384353 107 ntBASIC0.17□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-429P-201ENST00000384582 108 ntBASIC0.17□□□□□ -2.38
CCDC71LQ8N9Z2 MIR569-201ENST00000385228 96 ntBASIC0.17□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.98-201ENST00000363109 102 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 SNORD115-24-201ENST00000363528 82 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-1099P-201ENST00000363533 107 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 RNU6-716P-201ENST00000365621 103 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.420-201ENST00000384043 110 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 RNA5SP272-201ENST00000516095 111 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 RNU7-2P-201ENST00000516096 62 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 RNU7-6P-201ENST00000516845 62 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 RNA5SP330-201ENST00000517096 96 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 AP001328.1-201ENST00000528550 176 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 MIR548H5-201ENST00000580314 60 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 TUG1_4.1-201ENST00000619464 181 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 AC021753.1-201ENST00000635724 168 ntBASIC0.16□□□□□ -2.38
CCDC71LQ8N9Z2 Y_RNA.114-201ENST00000363265 113 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-865P-201ENST00000364772 107 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.400-201ENST00000383963 111 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-187P-201ENST00000384139 106 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 MIR548L-201ENST00000408303 86 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 AC108059.2-201ENST00000434626 151 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 AC138869.1-201ENST00000568623 124 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 MIR548X2-201ENST00000579776 100 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 AC087741.2-201ENST00000619415 172 ntBASIC0.15□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 RNA5SP325-201ENST00000363756 130 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.215-201ENST00000364204 112 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.328-201ENST00000365208 113 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 MIR635-201ENST00000384830 98 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 MIR1263-201ENST00000408324 86 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 BX276092.1-201ENST00000427368 251 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-863P-201ENST00000515989 104 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 RN7SKP19-201ENST00000516016 252 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-426P-201ENST00000516464 97 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-794P-201ENST00000517261 64 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 AC069113.3-201ENST00000521019 150 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 MIR6755-201ENST00000619993 66 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 AP001340.1-201ENST00000624405 217 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 AP001362.1-201ENST00000625165 124 ntBASIC0.14□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.127-201ENST00000363386 109 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.170-201ENST00000363746 110 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 RNU4-67P-201ENST00000364569 141 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.258-201ENST00000364613 105 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.555-201ENST00000384673 110 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-735P-201ENST00000410612 107 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 AC244505.6-201ENST00000452829 130 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 RNU7-129P-201ENST00000516128 62 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 MIR4752-201ENST00000579672 72 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.773-201ENST00000607168 90 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 RNU7-10P-201ENST00000607194 63 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 MIR376B-201ENST00000614515 100 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 AL109933.3-201ENST00000619095 188 ntBASIC0.13□□□□□ -2.39
CCDC71LQ8N9Z2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-647P-201ENST00000364243 107 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.221-201ENST00000364248 96 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 SNORD115-35-201ENST00000365122 82 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-1126P-201ENST00000384002 107 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 RNU7-104P-201ENST00000459398 79 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 TRAJ51-201ENST00000504127 63 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-781P-201ENST00000516377 101 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-255P-201ENST00000516957 105 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 RNU7-161P-201ENST00000517289 62 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 MIR4514-201ENST00000581410 57 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 MIR1255B1-201ENST00000636325 63 ntBASIC0.12□□□□□ -2.39
CCDC71LQ8N9Z2 SNORA9.1-201ENST00000362412 131 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 SNORD115-19-201ENST00000363098 82 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 SNORD115-18-201ENST00000363293 82 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.180-201ENST00000363867 113 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 SNORD115-17-201ENST00000364612 82 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.488-201ENST00000384403 102 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 MIR34C-201ENST00000384831 77 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 MIR759-201ENST00000390224 91 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 AL158147.1-201ENST00000443970 75 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 RNU7-200P-201ENST00000516105 62 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 MIR3163-201ENST00000581592 73 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 RNU1-29P-201ENST00000606574 126 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 U7.2-201ENST00000607576 63 ntBASIC0.11□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-235P-201ENST00000362644 107 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 RNA5SP403-201ENST00000363598 108 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.198-201ENST00000364013 98 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-726P-201ENST00000364680 107 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 MIR599-201ENST00000385069 95 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 MIR760-201ENST00000390220 80 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-1234P-201ENST00000516877 103 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 RNU6-1212P-201ENST00000517023 104 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
CCDC71LQ8N9Z2 Y_RNA.213-201ENST00000364178 111 ntBASIC0.09□□□□□ -2.4
CCDC71LQ8N9Z2 Y_RNA.360-201ENST00000365512 102 ntBASIC0.09□□□□□ -2.4
CCDC71LQ8N9Z2 Y_RNA.464-201ENST00000384282 110 ntBASIC0.09□□□□□ -2.4
CCDC71LQ8N9Z2 Y_RNA.506-201ENST00000384494 102 ntBASIC0.09□□□□□ -2.4
CCDC71LQ8N9Z2 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms