Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 RNU6-820P-201ENST00000384273 107 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 RNU6-1065P-201ENST00000384513 106 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 RNU6-1275P-201ENST00000391087 107 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 RNU6-972P-201ENST00000391208 107 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 RNU6-613P-201ENST00000410412 108 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 SPINT5P-201ENST00000448174 155 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 AC138749.4-201ENST00000563970 127 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 MIR3664-201ENST00000579074 99 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 AC090897.1-201ENST00000580909 226 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 AC012676.2-201ENST00000619258 186 ntBASIC1.53□□□□□ -2.16
SYNE4Q8N205 Y_RNA.173-201ENST00000363776 113 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 Y_RNA.178-201ENST00000363832 102 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 RNU6-497P-201ENST00000365316 104 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 SNORA2B-201ENST00000384583 137 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 Y_RNA.567-201ENST00000384736 106 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 MIR758-201ENST00000390227 88 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 RNU4-83P-201ENST00000410863 133 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 snoU13.21-201ENST00000459368 105 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 MIR4668-201ENST00000582284 70 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 AC025521.1-201ENST00000621624 286 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 AP001362.1-201ENST00000625165 124 ntBASIC1.52□□□□□ -2.17
SYNE4Q8N205 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SYNE4Q8N205 RNU6-228P-201ENST00000362700 106 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 RNY1P1-201ENST00000364372 112 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 RNU6-787P-201ENST00000384032 107 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 MIR181B2-201ENST00000385004 89 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 Y_RNA.620-201ENST00000411009 88 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.51□□□□□ -2.17
SYNE4Q8N205 RNU6-902P-201ENST00000517212 91 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 RN7SL793P-201ENST00000583259 296 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 MIR4439-201ENST00000583746 80 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 U6.109-201ENST00000636749 87 ntBASIC1.51□□□□□ -2.17
SYNE4Q8N205 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SYNE4Q8N205 Y_RNA.98-201ENST00000363109 102 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 RNA5SP264-201ENST00000363115 107 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 SNORD115-27-201ENST00000364430 82 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 RNU6-396P-201ENST00000365369 105 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 MIR222-201ENST00000384992 110 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SYNE4Q8N205 RNU6-1165P-201ENST00000410119 107 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 RNA5SP225-201ENST00000410874 135 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 RNU7-62P-201ENST00000458856 62 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 RPL30P7-201ENST00000479312 323 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 AL513043.2-201ENST00000573941 143 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 RNU6-90P-201ENST00000606352 106 ntBASIC1.5□□□□□ -2.17
SYNE4Q8N205 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
SYNE4Q8N205 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 SNORD116-10-201ENST00000363791 102 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 Y_RNA.609-201ENST00000410669 89 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 AC015818.7-201ENST00000428754 109 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 AC087499.7-201ENST00000441958 109 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 AP003327.1-201ENST00000529684 127 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 AC133485.1-201ENST00000567176 124 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
SYNE4Q8N205 HSBP1P2-201ENST00000299671 229 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNA5SP133-201ENST00000363368 119 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 Y_RNA.168-201ENST00000363740 102 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-979P-201ENST00000383896 107 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 SNORD116-22-201ENST00000384430 92 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-447P-201ENST00000410293 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-1118P-201ENST00000410382 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-1076P-201ENST00000410397 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-355P-201ENST00000410427 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-791P-201ENST00000410467 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-705P-201ENST00000410601 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-1100P-201ENST00000410691 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-860P-201ENST00000410860 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-1217P-201ENST00000411276 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNU6-785P-201ENST00000411324 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 BX276092.1-201ENST00000427368 251 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 U6.90-201ENST00000614007 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 IGLL4P-201ENST00000614590 133 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 U6.70-201ENST00000620287 104 ntBASIC1.48□□□□□ -2.17
SYNE4Q8N205 RNY1P2-201ENST00000364820 117 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 SNORD78.1-201ENST00000390866 65 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 RPL39P39-201ENST00000455840 151 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 AL133373.1-201ENST00000497098 94 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 MIR2115-201ENST00000516657 100 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 MTND5P40-201ENST00000559945 246 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 MIR4500-201ENST00000579472 76 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 MIR5588-201ENST00000581890 63 ntBASIC1.47□□□□□ -2.17
SYNE4Q8N205 Y_RNA.363-201ENST00000365529 113 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 RNU6-1124P-201ENST00000384169 107 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 MT-TN-201ENST00000387400 73 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.46□□□□□ -2.18
SYNE4Q8N205 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 SNORA25.16-201ENST00000516741 121 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 RN7SKP88-201ENST00000516847 250 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 MIR4295-201ENST00000585286 85 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 AP000753.3-201ENST00000604083 169 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 7SK.8-201ENST00000612110 250 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 7SK.11-201ENST00000615477 250 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 7SK.13-201ENST00000622040 250 ntBASIC1.46□□□□□ -2.18
SYNE4Q8N205 Y_RNA.96-201ENST00000363092 109 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms