Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 MIR27B-201ENST00000385129 97 ntBASIC2.29□□□□□ -2.04
RETREG3Q86VR2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RETREG3Q86VR2 MIR3140-201ENST00000583685 90 ntBASIC2.29□□□□□ -2.04
RETREG3Q86VR2 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
RETREG3Q86VR2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RETREG3Q86VR2 RNU6-340P-201ENST00000364005 107 ntBASIC2.28□□□□□ -2.04
RETREG3Q86VR2 MIR942-201ENST00000401111 86 ntBASIC2.28□□□□□ -2.04
RETREG3Q86VR2 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.28□□□□□ -2.04
RETREG3Q86VR2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
RETREG3Q86VR2 RNU6-330P-201ENST00000363015 107 ntBASIC2.27□□□□□ -2.05
RETREG3Q86VR2 RNU6-154P-201ENST00000384306 106 ntBASIC2.27□□□□□ -2.05
RETREG3Q86VR2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.27□□□□□ -2.05
RETREG3Q86VR2 RPL23AP94-201ENST00000512518 302 ntBASIC2.27□□□□□ -2.05
RETREG3Q86VR2 RNU7-156P-201ENST00000517214 74 ntBASIC2.27□□□□□ -2.05
RETREG3Q86VR2 AC036111.3-201ENST00000526389 112 ntBASIC2.27□□□□□ -2.05
RETREG3Q86VR2 MIR4672-201ENST00000583126 81 ntBASIC2.27□□□□□ -2.05
RETREG3Q86VR2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RETREG3Q86VR2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.27□□□□□ -2.05
RETREG3Q86VR2 RNU6-681P-201ENST00000364012 104 ntBASIC2.26□□□□□ -2.05
RETREG3Q86VR2 RNU6-540P-201ENST00000384622 101 ntBASIC2.26□□□□□ -2.05
RETREG3Q86VR2 RNU6-291P-201ENST00000384720 107 ntBASIC2.26□□□□□ -2.05
RETREG3Q86VR2 RNU6-935P-201ENST00000410371 100 ntBASIC2.26□□□□□ -2.05
RETREG3Q86VR2 AL513328.1-201ENST00000446460 224 ntBASIC2.26□□□□□ -2.05
RETREG3Q86VR2 AL512310.8-201ENST00000550183 120 ntBASIC2.26□□□□□ -2.05
RETREG3Q86VR2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RETREG3Q86VR2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RETREG3Q86VR2 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
RETREG3Q86VR2 MIR17-201ENST00000385012 84 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RETREG3Q86VR2 RNU2-59P-201ENST00000410482 191 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 AC048334.1-201ENST00000477975 159 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 MIR5089-201ENST00000580047 84 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 MIR4435-1-201ENST00000582552 80 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 MTRNR2L2-201ENST00000604882 87 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 AL627230.6-201ENST00000611129 280 ntBASIC2.25□□□□□ -2.05
RETREG3Q86VR2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
RETREG3Q86VR2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RETREG3Q86VR2 AL359511.1-201ENST00000402970 211 ntBASIC2.24□□□□□ -2.05
RETREG3Q86VR2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
RETREG3Q86VR2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RETREG3Q86VR2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.24□□□□□ -2.05
RETREG3Q86VR2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RETREG3Q86VR2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RETREG3Q86VR2 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 RNU4-82P-201ENST00000362443 140 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 RNU6-364P-201ENST00000384387 107 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 RNU6-535P-201ENST00000384722 107 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 MIR451A-201ENST00000385059 72 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 SNORA75.2-201ENST00000391138 150 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 SNORA75.3-201ENST00000391231 150 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 AC108938.1-201ENST00000451204 136 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 AC026436.1-201ENST00000510537 270 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 AL645939.4-201ENST00000604495 135 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 MIR1291-201ENST00000627649 87 ntBASIC2.23□□□□□ -2.05
RETREG3Q86VR2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RETREG3Q86VR2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RETREG3Q86VR2 SNORD115-31-201ENST00000365318 82 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RETREG3Q86VR2 SNORD111-201ENST00000408139 94 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 MIR1265-201ENST00000408444 86 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 RNU6-1052P-201ENST00000411398 104 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 RPS26P5-201ENST00000418544 335 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 AC104435.1-201ENST00000483483 166 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 RNU6-719P-201ENST00000516671 104 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 U6.111-201ENST00000636093 83 ntBASIC2.22□□□□□ -2.05
RETREG3Q86VR2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
RETREG3Q86VR2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RETREG3Q86VR2 RNU6-800P-201ENST00000384473 103 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 RNU6-663P-201ENST00000391105 106 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 AC079804.2-201ENST00000490376 200 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 AC097510.1-201ENST00000510945 133 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 SNORA31.2-201ENST00000516019 134 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 RNU7-40P-201ENST00000516397 64 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 RN7SKP88-201ENST00000516847 250 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 AC023827.1-201ENST00000569247 97 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 MIR4676-201ENST00000583078 72 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 7SK.8-201ENST00000612110 250 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 7SK.11-201ENST00000615477 250 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 7SK.13-201ENST00000622040 250 ntBASIC2.21□□□□□ -2.06
RETREG3Q86VR2 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 Y_RNA.386-201ENST00000383913 105 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 Y_RNA.606-201ENST00000410579 103 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 RNU6-1265P-201ENST00000516342 103 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 RNU6-1057P-201ENST00000517162 102 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 MIR3675-201ENST00000583661 73 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 AC106800.4-201ENST00000614905 153 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 MIR6817-201ENST00000615588 66 ntBASIC2.2□□□□□ -2.06
RETREG3Q86VR2 RNA5SP68-201ENST00000363885 119 ntBASIC2.19□□□□□ -2.06
RETREG3Q86VR2 RNA5SP245-201ENST00000364239 121 ntBASIC2.19□□□□□ -2.06
RETREG3Q86VR2 RNU6-301P-201ENST00000384277 107 ntBASIC2.19□□□□□ -2.06
RETREG3Q86VR2 RNA5SP508-201ENST00000411327 119 ntBASIC2.19□□□□□ -2.06
RETREG3Q86VR2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.19□□□□□ -2.06
RETREG3Q86VR2 RNU1-41P-201ENST00000516161 162 ntBASIC2.19□□□□□ -2.06
RETREG3Q86VR2 RNU1-48P-201ENST00000516400 162 ntBASIC2.19□□□□□ -2.06
RETREG3Q86VR2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
RETREG3Q86VR2 MIR938-201ENST00000401216 83 ntBASIC2.18□□□□□ -2.06
RETREG3Q86VR2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.18□□□□□ -2.06
RETREG3Q86VR2 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
RETREG3Q86VR2 MIR6766-201ENST00000622641 72 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 332 ms