Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MIR6082-201ENST00000613604 109 ntBASIC2.4□□□□□ -2.03
PTCRAQ6ISU1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 RNU6-654P-201ENST00000364373 107 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 SNORA6-201ENST00000384033 151 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 RNU6-439P-201ENST00000384188 106 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 AC093423.1-201ENST00000440817 142 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 RNU7-185P-201ENST00000459215 60 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 MIR3675-201ENST00000583661 73 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 MTRNR2L2-201ENST00000604882 87 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 MIR8074-201ENST00000615081 81 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
PTCRAQ6ISU1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 SNORD115-31-201ENST00000365318 82 ntBASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 AC097635.1-201ENST00000450678 155 ntBASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 AC097510.1-201ENST00000510945 133 ntBASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 RNU7-156P-201ENST00000517214 74 ntBASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 AL773524.1-201ENST00000614065 229 ntBASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
PTCRAQ6ISU1 Y_RNA.355-201ENST00000365462 98 ntBASIC2.37□□□□□ -2.03
PTCRAQ6ISU1 MIR1257-201ENST00000408490 117 ntBASIC2.37□□□□□ -2.03
PTCRAQ6ISU1 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.37□□□□□ -2.03
PTCRAQ6ISU1 FO624990.1-201ENST00000636373 85 ntBASIC2.37□□□□□ -2.03
PTCRAQ6ISU1 AC023934.1-201ENST00000574529 2389 ntBASIC2.37□□□□□ -2.03
PTCRAQ6ISU1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.37□□□□□ -2.03
PTCRAQ6ISU1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 RNU6-330P-201ENST00000363015 107 ntBASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 MIR221-201ENST00000385135 110 ntBASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 SNORD23.1-201ENST00000408212 104 ntBASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 AC108667.1-201ENST00000428618 249 ntBASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 AC138907.6-201ENST00000568401 126 ntBASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 AC138869.1-201ENST00000568623 124 ntBASIC2.36□□□□□ -2.03
PTCRAQ6ISU1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 Y_RNA.13-201ENST00000362403 112 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 RNA5SP276-201ENST00000362580 94 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 RNA5SP95-201ENST00000410319 137 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 AC244636.1-201ENST00000421152 228 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 AL606490.4-201ENST00000423117 127 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 MIR6845-201ENST00000613182 61 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 MIR8053-201ENST00000613344 75 ntBASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTCRAQ6ISU1 MIR337-201ENST00000362281 93 ntBASIC2.34□□□□□ -2.03
PTCRAQ6ISU1 Y_RNA.697-201ENST00000516776 113 ntBASIC2.34□□□□□ -2.03
PTCRAQ6ISU1 snoU13.31-201ENST00000607291 104 ntBASIC2.34□□□□□ -2.03
PTCRAQ6ISU1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
PTCRAQ6ISU1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 SNORD33-201ENST00000362761 85 ntBASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 MIR4713-201ENST00000582691 75 ntBASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 U6.100-201ENST00000636230 99 ntBASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PTCRAQ6ISU1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 RNU6-895P-201ENST00000384125 103 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 SNORA24B-201ENST00000384176 131 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 RNU6-935P-201ENST00000410371 100 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 MIR3664-201ENST00000579074 99 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 MIR3140-201ENST00000583685 90 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 AC005520.4-201ENST00000604337 90 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 U6.81-201ENST00000612550 106 ntBASIC2.32□□□□□ -2.04
PTCRAQ6ISU1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 MIR583-201ENST00000384846 75 ntBASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 RNU6-1054P-201ENST00000411293 104 ntBASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 MIR5089-201ENST00000580047 84 ntBASIC2.31□□□□□ -2.04
PTCRAQ6ISU1 RNU6-934P-201ENST00000365154 107 ntBASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 MIR599-201ENST00000385069 95 ntBASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 AL627230.6-201ENST00000611129 280 ntBASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 ZNF209P-201ENST00000593450 2304 ntBASIC2.3□□□□□ -2.04
PTCRAQ6ISU1 SNORD113.3-201ENST00000364630 78 ntBASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 MIR499A-201ENST00000384903 122 ntBASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 MIR125B2-201ENST00000385128 89 ntBASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 U3.27-201ENST00000391237 200 ntBASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 RNU6-630P-201ENST00000391258 106 ntBASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTCRAQ6ISU1 MIR378A-201ENST00000362177 66 ntBASIC2.28□□□□□ -2.04
PTCRAQ6ISU1 snoU13.9-201ENST00000458927 103 ntBASIC2.28□□□□□ -2.04
PTCRAQ6ISU1 MIR8063-201ENST00000621930 81 ntBASIC2.28□□□□□ -2.04
PTCRAQ6ISU1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PTCRAQ6ISU1 SNORA25.4-201ENST00000363666 124 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms