Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.23□□□□□ -2.21
ZNF260Q3ZCT1 MIR4498-201ENST00000577599 66 ntBASIC1.23□□□□□ -2.21
ZNF260Q3ZCT1 snoU13.31-201ENST00000607291 104 ntBASIC1.23□□□□□ -2.21
ZNF260Q3ZCT1 AL512598.1-201ENST00000610158 273 ntBASIC1.23□□□□□ -2.21
ZNF260Q3ZCT1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ZNF260Q3ZCT1 Y_RNA.119-201ENST00000363301 96 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 SNORA67.6-201ENST00000391093 99 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 RNU6-850P-201ENST00000516934 103 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 MTND5P40-201ENST00000559945 246 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 MIR4491-201ENST00000581087 68 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 MIR3202-2-201ENST00000635980 79 ntBASIC1.22□□□□□ -2.21
ZNF260Q3ZCT1 Y_RNA.313-201ENST00000365095 103 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 SNORD38.2-201ENST00000384470 69 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 BX276092.1-201ENST00000427368 251 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 AL161932.1-201ENST00000437408 146 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 RNU7-85P-201ENST00000458851 63 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 MIR4500-201ENST00000579472 76 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-1125P-201ENST00000363601 107 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-571P-201ENST00000384128 107 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-524P-201ENST00000384270 107 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-480P-201ENST00000384332 107 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 SNORA75.2-201ENST00000391138 150 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 SNORA75.3-201ENST00000391231 150 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 AL354695.1-201ENST00000427935 228 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 SNORD4B-201ENST00000459083 72 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 SNORA25.16-201ENST00000516741 121 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 RN7SKP88-201ENST00000516847 250 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 7SK.8-201ENST00000612110 250 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 7SK.11-201ENST00000615477 250 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 7SK.13-201ENST00000622040 250 ntBASIC1.2□□□□□ -2.22
ZNF260Q3ZCT1 RNU1-36P-201ENST00000365130 165 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-279P-201ENST00000391297 101 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 Y_RNA.611-201ENST00000410682 108 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 AP1B1P2-201ENST00000416196 106 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 MIR18B-201ENST00000454574 71 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 AC036111.3-201ENST00000526389 112 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.19□□□□□ -2.22
ZNF260Q3ZCT1 SNORD36A-201ENST00000362874 73 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-242P-201ENST00000384359 107 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 RNU7-106P-201ENST00000459514 67 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-531P-201ENST00000516694 104 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 AL645939.4-201ENST00000604495 135 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 MIR8066-201ENST00000617280 78 ntBASIC1.18□□□□□ -2.22
ZNF260Q3ZCT1 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-369P-201ENST00000362515 102 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 Y_RNA.426-201ENST00000384068 113 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 RNU7-95P-201ENST00000459222 64 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ZNF260Q3ZCT1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 Y_RNA.94-201ENST00000363068 106 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 Y_RNA.437-201ENST00000384113 113 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 MIR516A2-201ENST00000384888 90 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 MIR516A1-201ENST00000385033 90 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 Y_RNA.607-201ENST00000410597 98 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 AC015818.7-201ENST00000428754 109 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 RNU7-185P-201ENST00000459215 60 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 RNU6-75P-201ENST00000515944 104 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 RNU7-153P-201ENST00000516455 62 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 AC140658.3-201ENST00000567603 271 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 MIR4781-201ENST00000585250 76 ntBASIC1.16□□□□□ -2.22
ZNF260Q3ZCT1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.15□□□□□ -2.22
ZNF260Q3ZCT1 ZNF209P-201ENST00000593450 2304 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 Y_RNA.316-201ENST00000365118 111 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 SNORD83.1-201ENST00000411362 77 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 snoU13.11-201ENST00000459219 104 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 TRMT112P2-201ENST00000512910 132 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 SNORA31.2-201ENST00000516019 134 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 AL359821.1-201ENST00000605519 182 ntBASIC1.15□□□□□ -2.23
ZNF260Q3ZCT1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 MIR519C-201ENST00000385053 87 ntBASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 SNORD93-201ENST00000408813 74 ntBASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 RNU6-955P-201ENST00000410497 104 ntBASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 RNU6-857P-201ENST00000515893 110 ntBASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.14□□□□□ -2.23
ZNF260Q3ZCT1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 261.9 ms