Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 DLEU2_1.2-201ENST00000614667 120 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 RNU6-818P-201ENST00000364837 108 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 AC009161.1-201ENST00000417306 376 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 AC024614.3-201ENST00000637860 256 ntBASIC-1.11□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 RNU6-1059P-201ENST00000363752 98 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 U6.92-201ENST00000636464 89 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 SNORA32-201ENST00000384072 121 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 MTND4LP30-201ENST00000454092 297 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 RNU7-24P-201ENST00000458867 62 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 AC019235.1-201ENST00000503847 207 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 RN7SKP298-201ENST00000515950 94 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 RNU6-307P-201ENST00000516743 106 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 AC009094.1-201ENST00000564443 426 ntBASIC-1.12□□□□□ -2.59
CHD9Q3L8U1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 MIR516A2-201ENST00000384888 90 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 MIR516A1-201ENST00000385033 90 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 RNU6-566P-201ENST00000516790 107 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 AL359881.1-201ENST00000602916 267 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 C8orf59P2-201ENST00000603441 271 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 MIR6128-201ENST00000615528 109 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 MIR376A2-201ENST00000636782 80 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 SNORA79-201ENST00000408376 140 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 RNU6-311P-201ENST00000516224 102 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 AC087741.2-201ENST00000619415 172 ntBASIC-1.13□□□□□ -2.59
CHD9Q3L8U1 MIR624-201ENST00000385217 97 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-835P-201ENST00000516974 104 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-690P-201ENST00000365242 106 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 SNORD38.2-201ENST00000384470 69 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-75P-201ENST00000515944 104 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-191P-201ENST00000516295 94 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-719P-201ENST00000516671 104 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-570P-201ENST00000517051 105 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 MIR367-201ENST00000362299 68 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-664P-201ENST00000362381 107 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6-235P-201ENST00000362644 107 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 AL512360.1-201ENST00000555346 234 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 AC090617.8-201ENST00000623339 167 ntBASIC-1.14□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 RNU6-845P-201ENST00000362578 103 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 RNY4P10-201ENST00000365571 96 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 SNORA69.1-201ENST00000390904 137 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 MIR1255B2-201ENST00000408618 67 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 MTND5P5-201ENST00000503764 376 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 AC138907.4-201ENST00000570107 226 ntBASIC-1.15□□□□□ -2.59
CHD9Q3L8U1 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 SNORD74.6-201ENST00000364796 70 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 RNU6-472P-201ENST00000384299 107 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 MT-TT-201ENST00000387460 66 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 MTATP6P19-201ENST00000413797 659 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 AL731563.1-201ENST00000442202 214 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 MRPS35P2-201ENST00000508242 191 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 MIR4490-201ENST00000582647 84 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 AC084782.3-201ENST00000612282 578 ntBASIC-1.16□□□□□ -2.59
CHD9Q3L8U1 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 RNU6-888P-201ENST00000363010 101 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 MIR548E-201ENST00000408287 88 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 RNU7-2P-201ENST00000516096 62 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 MIR4790-201ENST00000577799 79 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 AC009779.6-201ENST00000603972 165 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 AC015540.1-201ENST00000615828 501 ntBASIC-1.16□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.120-201ENST00000363304 110 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 RNU6-164P-201ENST00000364604 103 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 RNU2-35P-201ENST00000516446 142 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 RNA5SP153-201ENST00000516498 76 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 SNORA63.6-201ENST00000364921 119 ntBASIC-1.17□□□□□ -2.6
CHD9Q3L8U1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms